| Transcript ID | Brain |
|---|---|
| ENST00000358385 | 8.076±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | atlastin GTPase 1 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000198513  |
ATL1 | 9606 | + |
14:50532509-50633068  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000358385 |
ATL1-001 | 50560025-50633068 | protein_coding | ||
| ENST00000441560 |
ATL1-002 | 50533026-50633049 | protein_coding | ||
| ENST00000553509 |
ATL1-006 | 50559552-50587885 | protein_coding | ||
| ENST00000553746 |
ATL1-007 | 50590989-50591817 | retained_intron | ||
| ENST00000554886 |
ATL1-008 | 50560131-50613286 | protein_coding | ||
| ENST00000555266 |
ATL1-009 | 50614379-50628151 | nonsense_mediated_decay | ||
| ENST00000555960 |
ATL1-005 | 50559087-50590957 | protein_coding | ||
| ENST00000556067 |
ATL1-011 | 50628166-50632320 | nonsense_mediated_decay | ||
| ENST00000556478 |
ATL1-003 | 50532509-50587936 | processed_transcript | ||
| ENST00000557735 |
ATL1-012 | 50560287-50591048 | protein_coding | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005HO | CIL_0005HO_0002 | CGP | 14:50329592-50561126 |
| CIL_0005HD | CIL_0005HD_0002 | CGP | 14:50418501-50633068 |
| CIL_0005HE | CIL_0005HE_0002 | CGP | 14:50532509-50668331 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000137 | ISS | Golgi cis cisterna |
| GO:0003924 | IDA:IEA | GTPase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005525 | ISS:IEA | GTP binding |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0005789 | ISS | endoplasmic reticulum membrane |
| GO:0005794 | ISS | Golgi apparatus |
| GO:0006184 | IEA | GTP catabolic process |
| GO:0007029 | IDA | endoplasmic reticulum organization |
| GO:0007409 | ISS | axonogenesis |
| GO:0008219 | IEA | cell death |
| GO:0016021 | IDA | integral component of membrane |
| GO:0042802 | IDA | identical protein binding |
| GO:0042995 | IEA | cell projection |
| GO:0051260 | IDA | protein homooligomerization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000060481
|
atl1 | atlastin GTPase 1 | protein_coding | Danio_rerio | |
|
ENSMUSG00000021066
|
Atl1 | atlastin GTPase 1 | protein_coding | Mus_musculus | |
