C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atlastin GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358385 ATL1-001 ENSG00000198513 9606 + 14:50560025-50633068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000358385
Transcript ID Brain
ENST00000358385 8.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HO CIL_0005HO_0002 CGP 14:50329592-50561126
CIL_0005HD CIL_0005HD_0002 CGP 14:50418501-50633068
CIL_0005HE CIL_0005HE_0002 CGP 14:50532509-50668331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000137 ISS Golgi cis cisterna
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 ISS:IEA GTP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 ISS Golgi apparatus
GO:0006184 IEA GTP catabolic process
GO:0007029 IDA endoplasmic reticulum organization
GO:0007409 ISS axonogenesis
GO:0008219 IEA cell death
GO:0016021 IDA integral component of membrane
GO:0042802 IDA identical protein binding
GO:0042995 IEA cell projection
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021466 Atl1-201 protein_coding Mus_musculus 0 2756

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