C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GPN-loop GTPase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198522 GPN1 9606 + 2:27628247-27651508 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264718 GPN1-001 27628996-27651508 protein_coding
  ENST00000407583 GPN1-003 27628658-27650456 protein_coding
  ENST00000424214 GPN1-201 27628648-27650844 protein_coding
  ENST00000436280 GPN1-006 27629024-27638963 nonsense_mediated_decay
  ENST00000458167 GPN1-202 27628648-27650844 protein_coding
  ENST00000461249 GPN1-004 27629246-27647894 processed_transcript
  ENST00000478484 GPN1-007 27629052-27631640 retained_intron
  ENST00000481754 GPN1-002 27628247-27629927 processed_transcript
  ENST00000503738 GPN1-008 27628648-27650209 protein_coding
  ENST00000515877 GPN1-009 27628247-27650363 protein_coding
  ENST00000610189 GPN1-010 27629052-27650846 protein_coding
  ENST00000616939 GPN1-203 27628996-27650844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000458167ENST00000610189
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000458167 N/A N/A N/A N/A N/A N/A N/A N/A 3.980±0.00 N/A N/A
ENST00000610189 16.154±0.00 16.522±0.00 16.731±0.00 15.308±0.00 8.260±0.00 12.256±0.00 6.596±0.00 6.685±0.00 10.981±0.00 25.017±6.87 22.657±5.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D9 CIL_0001D9_0001 CGP 2:27582969-27629012
CIL_00013L CIL_00013L_0001 CGP 2:27625639-27651508
CIL_00013M CIL_00013M_0001 CGP 2:27628247-27663840

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043928 GPN1 GPN-loop GTPase 1 protein_coding Danio_rerio
ENSMUSG00000064037 Gpn1 GPN-loop GTPase 1 protein_coding Mus_musculus

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