C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPN-loop GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610189 GPN1-010 ENSG00000198522 9606 + 2:27629052-27650846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000610189
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000610189 16.154±0.00 16.522±0.00 16.731±0.00 15.308±0.00 8.260±0.00 12.256±0.00 6.596±0.00 6.685±0.00 10.981±0.00 25.017±6.87 22.657±5.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D9 CIL_0001D9_0001 CGP 2:27582969-27629012
CIL_00013L CIL_00013L_0001 CGP 2:27625639-27651508
CIL_00013M CIL_00013M_0001 CGP 2:27628247-27663840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076949 Gpn1-001 protein_coding Mus_musculus 0 1256
ENSMUST00000133891 Gpn1-006 retained_intron Mus_musculus 0 662
ENSMUST00000131628 Gpn1-002 retained_intron Mus_musculus 0 263
ENSMUST00000117700 Gpn1-003 protein_coding Mus_musculus 0 252
ENSMUST00000125689 Gpn1-007 retained_intron Mus_musculus 0 226
ENSMUST00000146880 Gpn1-005 nonsense_mediated_decay Mus_musculus 0 220

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