C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, beta-like 1 (with EGF-like repeat domains)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198542 ITGBL1 9606 + 13:101452593-101720856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376162 ITGBL1-201 101489952-101716443 protein_coding
  ENST00000376180 ITGBL1-003 101452615-101716444 protein_coding
  ENST00000474233 ITGBL1-002 101598146-101692944 retained_intron
  ENST00000490242 ITGBL1-006 101598145-101718344 protein_coding
  ENST00000545560 ITGBL1-007 101452667-101720856 protein_coding
  ENST00000610943 ITGBL1-202 101452593-101716445 protein_coding
  ENST00000618057 ITGBL1-203 101452593-101716443 protein_coding
  ENST00000622834 ITGBL1-204 101452662-101716439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENST00000376180ENST00000474233ENST00000618057
Transcript ID Muscle Placenta Testis
ENST00000376180 N/A 0.872±0.00 N/A
ENST00000474233 3.149±0.00 N/A N/A
ENST00000618057 N/A N/A 0.944±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G3 CIL_0004G3_0002 CGP 13:101053776-101720856
CIL_0000WJ CIL_0000WJ_0001 CGP 13:101452593-102402457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007155 TAS cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040985 itgbl1 integrin, beta-like 1 protein_coding Danio_rerio
ENSMUSG00000032925 Itgbl1 integrin, beta-like 1 protein_coding Mus_musculus

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