C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, beta-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032925 Itgbl1 10090 + 14:123659971-123975618 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049681 Itgbl1-001 123659971-123975618 protein_coding
  ENSMUST00000132026 Itgbl1-003 123661424-123975618 protein_coding
  ENSMUST00000142161 Itgbl1-002 123660125-123975056 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049681ENSMUST00000132026ENSMUST00000142161
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049681 0.809±0.18 1.202±0.15 2.826±0.05 0.967±0.27 0.211±0.05 1.701±0.08 0.155±0.09 0.086±0.04 1.210±0.42 0.906±0.25 1.167±0.59 0.379±0.33 1.912±0.69
ENSMUST00000132026 N/A N/A N/A N/A 0.173±0.00 N/A N/A 0.006±0.00 N/A 0.122±0.00 0.201±0.00 N/A N/A
ENSMUST00000142161 1.166±0.40 5.305±0.96 N/A 1.835±1.15 0.119±0.07 1.604±0.78 0.328±0.21 0.060±0.05 3.520±1.02 0.201±0.03 3.646±0.96 0.074±0.00 1.750±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G3 CIL_0004G3_0003 CGP 14:123276641-123975618
CIL_0000WJ CIL_0000WJ_0002 CGP 14:123659971-124677127

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040985 itgbl1 integrin, beta-like 1 protein_coding Danio_rerio
ENSG00000198542 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) protein_coding Homo_sapiens

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