C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: praja ring finger 2, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198961 PJA2 9606 - 5:109334709-109409994 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361189 PJA2-001 109334709-109409994 protein_coding
  ENST00000361557 PJA2-201 109334713-109383433 protein_coding
  ENST00000511624 PJA2-003 109379167-109409316 processed_transcript
  ENST00000512822 PJA2-002 109383396-109409314 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361189ENST00000361557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361189 15.833±0.00 8.704±0.00 10.191±0.00 51.439±8.60 13.090±6.21 14.080±3.41 10.235±0.73 11.150±1.94 20.015±17.36 17.599±3.74 5.833±0.64 9.702±7.85 8.319±1.17 12.463±0.84
ENST00000361557 9.052±0.00 10.829±0.00 N/A 33.207±21.82 12.770±0.00 27.634±0.00 8.160±0.00 11.826±4.12 7.140±0.00 10.858±0.00 7.211±0.00 8.290±4.48 6.419±2.39 13.396±6.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0001 CGP 5:108747822-109409994

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007616 ISS long-term memory
GO:0008270 IEA zinc ion binding
GO:0010738 IMP regulation of protein kinase A signaling
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0034236 IMP protein kinase A catalytic subunit binding
GO:0034237 IMP protein kinase A regulatory subunit binding
GO:0045211 IEA postsynaptic membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022893 pja2 praja ring finger 2 protein_coding Danio_rerio
ENSMUSG00000024083 Pja2 praja 2, RING-H2 motif containing protein_coding Mus_musculus

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