C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361189 PJA2-001 ENSG00000198961 9606 - 5:109334709-109409994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361189
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361189 15.833±0.00 8.704±0.00 10.191±0.00 51.439±8.60 13.090±6.21 14.080±3.41 10.235±0.73 11.150±1.94 20.015±17.36 17.599±3.74 5.833±0.64 9.702±7.85 8.319±1.17 12.463±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0001 CGP 5:108747822-109409994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007616 ISS long-term memory
GO:0008270 IEA zinc ion binding
GO:0010738 IMP regulation of protein kinase A signaling
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0034236 IMP protein kinase A catalytic subunit binding
GO:0034237 IMP protein kinase A regulatory subunit binding
GO:0045211 IEA postsynaptic membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172818 Pja2-001 protein_coding Mus_musculus 0 2582
ENSMUST00000024888 Pja2-201 protein_coding Mus_musculus 0 2353
ENSMUST00000172733 Pja2-002 protein_coding Mus_musculus 0 1286
ENSMUST00000024889 Pja2-202 protein_coding Mus_musculus 0 1247

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