C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: praja 2, RING-H2 motif containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024083 Pja2 10090 - 17:64281005-64331916 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024888 Pja2-201 64281006-64313031 protein_coding
  ENSMUST00000024889 Pja2-202 64281006-64313031 protein_coding
  ENSMUST00000172733 Pja2-002 64281020-64331865 protein_coding
  ENSMUST00000172818 Pja2-001 64281005-64331916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024888ENSMUST00000024889ENSMUST00000172733ENSMUST00000172818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024888 3.276±0.53 3.813±0.69 7.866±1.26 29.602±0.00 2.145±0.54 2.243±0.31 1.970±0.00 2.677±0.64 1.469±0.67 5.878±2.47 4.180±0.12 6.069±3.52 4.944±1.23 8.041±0.00
ENSMUST00000024889 8.411±3.04 20.465±6.51 N/A 12.322±0.39 8.299±4.88 8.006±3.26 6.149±3.09 3.801±2.09 1.789±1.38 9.181±3.21 N/A 17.362±2.17 2.291±0.00 3.944±0.38
ENSMUST00000172733 4.147±1.59 6.436±0.00 14.467±3.65 17.629±13.59 3.438±1.31 5.801±1.80 3.973±1.02 4.019±0.82 2.624±0.58 5.953±1.61 12.886±0.84 6.008±3.50 6.548±2.99 4.952±1.75
ENSMUST00000172818 4.096±1.11 N/A 4.869±0.00 8.486±2.01 1.653±0.00 1.439±0.00 4.622±0.58 2.046±0.80 1.693±0.86 N/A 8.908±2.41 6.860±1.14 4.210±1.42 5.053±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0002 CGP 17:63896018-64331916

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0007616 ISS long-term memory
GO:0008270 IEA zinc ion binding
GO:0010738 ISS regulation of protein kinase A signaling
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0034236 ISS protein kinase A catalytic subunit binding
GO:0034237 ISS protein kinase A regulatory subunit binding
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022893 pja2 praja ring finger 2 protein_coding Danio_rerio
ENSG00000198961 PJA2 praja ring finger 2, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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