C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAR-related orphan receptor B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198963 RORB 9606 + 9:74497365-74693177 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376896 RORB-001 74497365-74693177 protein_coding
  ENST00000396204 RORB-201 74615600-74687201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376896ENST00000396204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376896 0.462±0.00 0.104±0.00 0.263±0.00 8.929±0.70 0.080±0.00 0.117±0.05 0.340±0.00 0.185±0.00 0.010±0.00 0.062±0.00 0.003±0.00 0.023±0.00 1.393±0.81 0.131±0.08
ENST00000396204 N/A N/A N/A N/A 0.092±0.07 0.065±0.00 0.318±0.00 N/A N/A 0.242±0.00 N/A N/A N/A 0.118±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 ISS:IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007601 IEA visual perception
GO:0008134 IEA transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0030522 IEA intracellular receptor signaling pathway
GO:0035881 ISS amacrine cell differentiation
GO:0042462 ISS eye photoreceptor cell development
GO:0042752 ISS regulation of circadian rhythm
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045668 ISS negative regulation of osteoblast differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046548 ISS retinal rod cell development
GO:0046549 ISS retinal cone cell development
GO:0048511 IEA rhythmic process
GO:0060041 ISS retina development in camera-type eye
GO:0071300 ISS cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033498 rorb RAR-related orphan receptor B protein_coding Danio_rerio
ENSMUSG00000036192 Rorb RAR-related orphan receptor beta protein_coding Mus_musculus

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