C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204316 MRPL38 9606 - 17:75898643-75905413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309352 MRPL38-001 75898643-75905413 protein_coding
  ENST00000410030 MRPL38-002 75904244-75905093 processed_transcript
  ENST00000461602 MRPL38-004 75901744-75904882 retained_intron
  ENST00000464758 MRPL38-003 75901891-75904901 retained_intron
  ENST00000471434 MRPL38-010 75900795-75901517 retained_intron
  ENST00000474548 MRPL38-007 75901660-75902287 retained_intron
  ENST00000477023 MRPL38-012 75899159-75900924 processed_transcript
  ENST00000477371 MRPL38-011 75899158-75901424 retained_intron
  ENST00000477736 MRPL38-009 75900812-75904838 retained_intron
  ENST00000480203 MRPL38-013 75898928-75900863 processed_transcript
  ENST00000483393 MRPL38-014 75898952-75899868 retained_intron
  ENST00000486101 MRPL38-015 75898644-75899581 retained_intron
  ENST00000493104 MRPL38-005 75901183-75904871 retained_intron
  ENST00000493383 MRPL38-006 75901555-75904858 retained_intron
  ENST00000494179 MRPL38-008 75901237-75904859 retained_intron
  ENST00000585475 MRPL38-016 75901242-75904878 processed_transcript
  ENST00000588620 MRPL38-017 75898951-75900473 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309352ENST00000410030ENST00000486101ENST00000493383ENST00000585475
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309352 12.079±0.00 29.843±0.00 N/A 16.846±0.00 8.550±6.91 8.353±7.30 12.894±11.84 27.789±0.00 32.850±0.00 10.302±8.89 29.097±23.44 25.798±17.34 22.145±7.55 26.192±3.10
ENST00000410030 N/A N/A 1.035±0.00 N/A N/A 4.530±0.00 N/A N/A N/A N/A 4.715±0.00 N/A 28.462±0.00 N/A
ENST00000486101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.578±0.00 34.219±0.00 N/A
ENST00000493383 N/A N/A N/A N/A N/A N/A N/A 2.615±0.00 3.090±0.00 N/A N/A N/A N/A N/A
ENST00000585475 17.786±0.00 N/A N/A N/A 16.759±0.00 21.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_0003KG CIL_0003KG_0002 CGP 17:75880335-75905413

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005840 IEA ribosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039667 mrpl38 mitochondrial ribosomal protein L38 protein_coding Danio_rerio
ENSMUSG00000020775 Mrpl38 mitochondrial ribosomal protein L38 protein_coding Mus_musculus

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