C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020775 Mrpl38 10090 - 11:116131817-116138868 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106439 Mrpl38-001 116131817-116138868 protein_coding
  ENSMUST00000124722 Mrpl38-006 116134256-116134627 retained_intron
  ENSMUST00000133159 Mrpl38-004 116132785-116138789 retained_intron
  ENSMUST00000138457 Mrpl38-003 116137782-116138865 retained_intron
  ENSMUST00000142550 Mrpl38-002 116131821-116138775 retained_intron
  ENSMUST00000145655 Mrpl38-005 116134062-116134456 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106439ENSMUST00000133159ENSMUST00000138457ENSMUST00000142550
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106439 16.694±1.94 27.474±2.95 9.898±3.06 11.015±2.69 14.074±3.52 12.837±0.91 15.791±4.40 26.202±2.08 20.240±6.15 9.626±0.51 27.108±1.17 15.045±6.02 19.760±13.98 17.789±7.39
ENSMUST00000133159 8.705±1.79 25.321±7.19 4.195±0.02 13.537±8.96 6.949±1.39 8.550±1.93 N/A 5.996±0.00 4.590±0.00 6.653±0.84 N/A 9.210±6.19 12.317±8.15 11.077±0.00
ENSMUST00000138457 N/A 19.146±2.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.900±0.00 N/A
ENSMUST00000142550 N/A N/A N/A 1.175±0.00 N/A N/A N/A N/A N/A N/A N/A 12.968±9.82 N/A 4.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0003KG CIL_0003KG_0003 CGP 11:116121846-116138868

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005761 ISS mitochondrial ribosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039667 mrpl38 mitochondrial ribosomal protein L38 protein_coding Danio_rerio
ENSG00000204316 MRPL38 mitochondrial ribosomal protein L38 protein_coding Homo_sapiens

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