C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sp5 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204335 SP5 9606 + 2:170715351-170718078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375281 SP5-001 170715351-170718078 protein_coding
  ENST00000487037 SP5-002 170716042-170716488 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375281ENST00000487037
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375281 4.247±0.00 0.182±0.00 0.046±0.01 0.463±0.27 0.304±0.23 0.017±0.00 0.478±0.24 0.401±0.19 0.163±0.14 0.080±0.00 10.344±12.86 0.881±0.76 1.120±0.32
ENST00000487037 N/A 0.570±0.00 N/A 0.795±0.00 N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SG CIL_0004SG_0001 CGP 2:170178145-170718078
CIL_0004SA CIL_0004SA_0001 CGP 2:170715351-170798971

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0036342 IEA post-anal tail morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0060349 IEA bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076571 sp5a Sp5 transcription factor a protein_coding Danio_rerio
ENSMUSG00000075304 Sp5 trans-acting transcription factor 5 protein_coding Mus_musculus

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