C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204351 SKIV2L 9606 + 6:31959080-31969755 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375394 SKIV2L-001 31959080-31969755 protein_coding
  ENST00000461073 SKIV2L-016 31959157-31962814 nonsense_mediated_decay
  ENST00000461915 SKIV2L-007 31966828-31968444 processed_transcript
  ENST00000465703 SKIV2L-002 31959141-31969751 retained_intron
  ENST00000466290 SKIV2L-006 31961497-31963010 retained_intron
  ENST00000470453 SKIV2L-011 31968524-31969587 processed_transcript
  ENST00000471818 SKIV2L-012 31968323-31969751 processed_transcript
  ENST00000474839 SKIV2L-017 31959171-31969748 nonsense_mediated_decay
  ENST00000483553 SKIV2L-010 31967759-31969751 nonsense_mediated_decay
  ENST00000484835 SKIV2L-009 31967103-31968986 retained_intron
  ENST00000485349 SKIV2L-014 31968454-31969408 retained_intron
  ENST00000488648 SKIV2L-003 31959117-31961386 processed_transcript
  ENST00000491994 SKIV2L-013 31968475-31969751 protein_coding
  ENST00000492900 SKIV2L-005 31959191-31959958 retained_intron
  ENST00000494058 SKIV2L-008 31967021-31968448 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000375394ENST00000461073ENST00000474839ENST00000488648ENST00000491994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000375394 6.574±0.00 6.712±0.00 N/A 5.725±2.04 3.567±1.24 3.888±0.79 3.194±1.99 5.426±1.89 2.110±0.17 8.194±0.00 6.205±3.52 10.201±3.97 7.757±1.30
ENST00000461073 N/A N/A 1.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474839 N/A 9.089±0.00 N/A N/A 4.219±0.00 3.890±0.00 N/A N/A 3.308±0.00 N/A 7.090±0.00 N/A N/A
ENST00000488648 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.128±0.00 N/A 7.967±0.00 N/A
ENST00000491994 N/A N/A N/A N/A N/A N/A N/A N/A 8.832±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004004 TAS ATP-dependent RNA helicase activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006200 TAS ATP catabolic process
GO:0008152 IEA metabolic process
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0055087 IDA Ski complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062206 skiv2l superkiller viralicidic activity 2 (S. cerevisiae homolog)-like protein_coding Danio_rerio
ENSMUSG00000040356 Skiv2l superkiller viralicidic activity 2-like (S. cerevisiae) protein_coding Mus_musculus

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