C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: superkiller viralicidic activity 2-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375394 SKIV2L-001 ENSG00000204351 9606 + 6:31959080-31969755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000375394
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000375394 6.574±0.00 6.712±0.00 5.725±2.04 3.567±1.24 3.888±0.79 3.194±1.99 5.426±1.89 2.110±0.17 8.194±0.00 6.205±3.52 10.201±3.97 7.757±1.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004004 TAS ATP-dependent RNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006200 TAS ATP catabolic process
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0055087 IDA Ski complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046022 Skiv2l-001 protein_coding Mus_musculus 0 4337
ENSMUST00000174363 Skiv2l-004 retained_intron Mus_musculus 0 2656
ENSMUST00000174887 Skiv2l-003 retained_intron Mus_musculus 0 2656
ENSMUST00000174226 Skiv2l-002 retained_intron Mus_musculus 0 2399
ENSMUST00000172878 Skiv2l-010 retained_intron Mus_musculus 0 918
ENSMUST00000172966 Skiv2l-006 nonsense_mediated_decay Mus_musculus 0 848
ENSMUST00000173403 Skiv2l-007 retained_intron Mus_musculus 0 837
ENSMUST00000173935 Skiv2l-ps1-001 unprocessed_pseudogene Mus_musculus 0 638
ENSMUST00000173415 Skiv2l-011 protein_coding Mus_musculus 0 440
ENSMUST00000172803 Skiv2l-012 retained_intron Mus_musculus 0 392
ENSMUST00000172686 Skiv2l-008 retained_intron Mus_musculus 0 307
ENSMUST00000173305 Skiv2l-009 retained_intron Mus_musculus 0 235

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