C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040356 Skiv2l 10090 - 17:34839228-34850210 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046022 Skiv2l-001 34839244-34850210 protein_coding
  ENSMUST00000172686 Skiv2l-008 34845104-34846639 retained_intron
  ENSMUST00000172803 Skiv2l-012 34840530-34841128 retained_intron
  ENSMUST00000172878 Skiv2l-010 34841356-34844456 retained_intron
  ENSMUST00000172966 Skiv2l-006 34846522-34850195 nonsense_mediated_decay
  ENSMUST00000173305 Skiv2l-009 34845240-34846031 retained_intron
  ENSMUST00000173403 Skiv2l-007 34845027-34847193 retained_intron
  ENSMUST00000173415 Skiv2l-011 34840602-34842865 protein_coding
  ENSMUST00000174226 Skiv2l-002 34839228-34850210 retained_intron
  ENSMUST00000174363 Skiv2l-004 34839297-34850198 retained_intron
  ENSMUST00000174887 Skiv2l-003 34839249-34850192 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046022ENSMUST00000174226ENSMUST00000174363
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046022 24.191±3.22 35.508±3.34 24.511±5.62 26.125±10.12 20.954±6.21 28.745±2.07 6.510±0.80 19.186±1.17 18.570±5.78 20.424±0.39 8.649±1.33 24.187±4.86 14.758±1.76 51.488±9.98
ENSMUST00000174226 7.840±0.41 12.890±0.53 5.349±0.98 6.803±2.06 10.401±1.37 10.225±1.87 3.061±0.50 5.773±0.22 4.918±1.64 8.498±0.53 1.284±0.00 8.845±2.00 6.990±0.00 12.441±0.47
ENSMUST00000174363 6.468±0.72 12.098±2.78 4.843±0.73 5.795±2.11 7.680±0.41 9.116±0.65 2.163±0.39 4.672±0.09 3.507±0.63 6.306±0.58 1.467±0.22 8.636±1.99 4.243±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RU CIL_0002RU_0002 CGP 17:34839228-34856372

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0008152 IEA metabolic process
GO:0055087 IEA Ski complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062206 skiv2l superkiller viralicidic activity 2 (S. cerevisiae homolog)-like protein_coding Danio_rerio
ENSG00000204351 SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) protein_coding Homo_sapiens

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