C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204815 TTC25 9606 + 17:41930635-41965651 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377540 TTC25-002 41930656-41965651 protein_coding
  ENST00000585530 TTC25-004 41935298-41937041 nonsense_mediated_decay
  ENST00000591658 TTC25-001 41930645-41965630 nonsense_mediated_decay
  ENST00000593239 TTC25-003 41930635-41938690 nonsense_mediated_decay
  ENST00000617460 TTC25-201 41930664-41965648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000377540ENST00000585530ENST00000591658ENST00000593239ENST00000617460
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000377540 N/A N/A N/A 0.142±0.00 N/A N/A N/A 1.337±0.00 N/A 8.109±3.18
ENST00000585530 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591658 N/A 0.079±0.00 0.024±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENST00000593239 N/A N/A N/A 0.106±0.00 N/A 0.172±0.00 0.205±0.00 N/A 0.182±0.00 N/A
ENST00000617460 N/A 0.784±0.00 0.152±0.00 N/A 0.245±0.00 N/A 4.152±0.00 3.049±2.13 0.381±0.20 27.378±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EG CIL_0006EG_0001 CGP 17:41866908-41965651
CIL_0000KT CIL_0000KT_0002 CGP 17:41930635-41977731

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058140 ttc25 tetratricopeptide repeat domain 25 protein_coding Danio_rerio
ENSDARG00000090531 ttc25 tetratricopeptide repeat domain 25 protein_coding Danio_rerio
ENSMUSG00000006784 Ttc25 tetratricopeptide repeat domain 25 protein_coding Mus_musculus

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