C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006784 Ttc25 10090 + 11:100545607-100572568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006976 Ttc25-005 100545694-100572568 protein_coding
  ENSMUST00000092684 Ttc25-001 100545607-100571963 protein_coding
  ENSMUST00000127389 Ttc25-004 100549547-100550328 retained_intron
  ENSMUST00000132143 Ttc25-002 100545694-100569805 retained_intron
  ENSMUST00000150331 Ttc25-003 100545710-100550210 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006976ENSMUST00000092684ENSMUST00000132143ENSMUST00000150331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006976 N/A N/A N/A N/A 0.272±0.00 0.074±0.00 0.094±0.04 0.136±0.00 N/A N/A 0.083±0.00 0.350±0.00 0.060±0.03 N/A
ENSMUST00000092684 0.311±0.10 N/A 0.112±0.01 0.281±0.12 0.214±0.00 0.140±0.04 0.064±0.00 0.276±0.07 0.031±0.01 0.491±0.12 0.114±0.07 1.986±1.79 0.101±0.04 66.552±72.12
ENSMUST00000132143 0.259±0.18 0.492±0.25 0.026±0.01 0.281±0.16 0.435±0.18 0.209±0.02 0.091±0.03 0.235±0.00 0.026±0.01 0.909±0.11 0.044±0.02 0.661±0.19 0.156±0.12 N/A
ENSMUST00000150331 N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EG CIL_0006EG_0002 CGP 11:100476353-100572568
CIL_0000KT CIL_0000KT_0003 CGP 11:100545607-100591729

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058140 ttc25 tetratricopeptide repeat domain 25 protein_coding Danio_rerio
ENSDARG00000090531 ttc25 tetratricopeptide repeat domain 25 protein_coding Danio_rerio
ENSG00000204815 TTC25 tetratricopeptide repeat domain 25 protein_coding Homo_sapiens

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