C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204859 ZBTB48 9606 + 1:6580001-6589280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319084 ZBTB48-004 6580001-6582299 protein_coding
  ENST00000377674 ZBTB48-001 6580048-6589280 protein_coding
  ENST00000435905 ZBTB48-005 6580017-6582245 protein_coding
  ENST00000466813 ZBTB48-007 6587256-6589160 nonsense_mediated_decay
  ENST00000466941 ZBTB48-008 6588687-6589280 retained_intron
  ENST00000482360 ZBTB48-002 6585302-6589280 retained_intron
  ENST00000488936 ZBTB48-006 6580088-6588105 protein_coding
  ENST00000498342 ZBTB48-003 6586207-6589280 retained_intron
  ENST00000619514 ZBTB48-201 6586207-6589271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319084ENST00000377674ENST00000435905ENST00000466813ENST00000466941ENST00000482360ENST00000488936ENST00000498342ENST00000619514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319084 N/A N/A N/A 0.381±0.00 0.352±0.00 N/A 0.134±0.00 N/A N/A N/A 0.588±0.00 N/A N/A N/A
ENST00000377674 1.322±0.00 2.878±0.00 N/A 1.572±0.00 3.310±0.00 0.910±0.83 0.104±0.00 1.590±0.00 N/A N/A 1.619±0.00 5.046±0.01 N/A 12.124±3.72
ENST00000435905 N/A N/A 0.629±0.00 N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A 1.657±0.00 7.967±0.00
ENST00000466813 N/A N/A 0.559±0.00 0.308±0.00 1.570±0.00 2.984±2.54 1.274±0.00 4.492±3.85 2.530±0.00 0.856±0.00 2.009±1.74 10.775±0.00 2.900±0.00 6.244±0.00
ENST00000466941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.231±0.00 9.936±0.00
ENST00000482360 N/A N/A N/A N/A N/A 0.059±0.00 0.286±0.16 N/A 0.462±0.10 N/A 0.441±0.00 3.311±0.99 1.184±0.00 N/A
ENST00000488936 N/A N/A N/A N/A N/A N/A 0.366±0.25 0.356±0.00 1.782±0.00 N/A 0.360±0.00 1.272±0.00 N/A N/A
ENST00000498342 N/A N/A N/A N/A N/A N/A N/A N/A 0.526±0.00 N/A N/A 0.540±0.00 N/A N/A
ENST00000619514 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039263 zbtb48 zinc finger and BTB domain containing 48 protein_coding Danio_rerio
ENSMUSG00000028952 Zbtb48 zinc finger and BTB domain containing 48 protein_coding Mus_musculus

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