C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377674 ZBTB48-001 ENSG00000204859 9606 + 1:6580048-6589280 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryTestisENST00000377674
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000377674 1.322±0.00 2.878±0.00 1.572±0.00 3.310±0.00 0.910±0.83 0.104±0.00 1.590±0.00 1.619±0.00 5.046±0.01 12.124±3.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066715 Zbtb48-009 protein_coding Mus_musculus 0 2281
ENSMUST00000123696 Zbtb48-002 retained_intron Mus_musculus 0 1286
ENSMUST00000155389 Zbtb48-001 nonsense_mediated_decay Mus_musculus 0 1249
ENSMUST00000156748 Zbtb48-005 nonsense_mediated_decay Mus_musculus 0 479
ENSMUST00000136212 Zbtb48-008 processed_transcript Mus_musculus 0 453
ENSMUST00000147895 Zbtb48-007 processed_transcript Mus_musculus 0 436
ENSMUST00000155441 Zbtb48-006 retained_intron Mus_musculus 0 418

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