C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028952 Zbtb48 10090 - 4:152019774-152027671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066715 Zbtb48-009 152019774-152027661 protein_coding
  ENSMUST00000123696 Zbtb48-002 152019776-152027671 retained_intron
  ENSMUST00000131935 Zbtb48-003 152026478-152027637 protein_coding
  ENSMUST00000136212 Zbtb48-008 152019800-152020616 processed_transcript
  ENSMUST00000147895 Zbtb48-007 152021109-152022106 processed_transcript
  ENSMUST00000155389 Zbtb48-001 152019774-152027661 nonsense_mediated_decay
  ENSMUST00000155441 Zbtb48-006 152022486-152026047 retained_intron
  ENSMUST00000156748 Zbtb48-005 152021592-152026444 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066715ENSMUST00000123696ENSMUST00000136212ENSMUST00000155389ENSMUST00000155441ENSMUST00000156748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066715 1.931±0.21 2.335±0.62 1.463±0.22 2.235±0.47 2.023±0.49 2.576±0.34 0.731±0.31 1.725±0.54 2.279±0.96 2.911±0.45 0.704±0.29 2.652±1.38 2.484±0.95 2.470±1.86
ENSMUST00000123696 1.681±0.00 0.785±0.02 1.314±0.70 0.840±0.32 N/A 1.601±0.63 0.521±0.25 0.666±0.07 1.550±0.48 0.930±0.00 0.311±0.10 2.376±0.52 1.605±0.54 0.987±0.43
ENSMUST00000136212 N/A N/A N/A 4.418±0.00 N/A N/A N/A N/A N/A N/A N/A 8.275±0.00 9.033±1.20 N/A
ENSMUST00000155389 N/A N/A N/A N/A N/A N/A 0.283±0.00 N/A N/A N/A 0.183±0.00 1.222±0.00 N/A N/A
ENSMUST00000155441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.585±0.00 N/A N/A
ENSMUST00000156748 N/A N/A N/A N/A 1.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MT CIL_0003MT_0002 CGP 4:152008803-152027671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039263 zbtb48 zinc finger and BTB domain containing 48 protein_coding Danio_rerio
ENSG00000204859 ZBTB48 zinc finger and BTB domain containing 48 protein_coding Homo_sapiens

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