C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 1121
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205054 LINC01121 9606 - 2:45164870-45323295 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378479 LINC01121-001 45174344-45254941 lincRNA
  ENST00000413669 LINC01121-006 45174340-45175211 lincRNA
  ENST00000427020 LINC01121-003 45164870-45192265 lincRNA
  ENST00000430650 LINC01121-004 45192179-45323295 lincRNA
  ENST00000454673 LINC01121-002 45187170-45192285 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378479ENST00000413669ENST00000427020ENST00000430650ENST00000454673
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378479 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.164±0.00 N/A N/A
ENST00000413669 N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.297±0.11 N/A N/A
ENST00000427020 0.062±0.00 N/A N/A N/A N/A 0.046±0.00 N/A 0.060±0.00 N/A N/A N/A 0.032±0.00 N/A
ENST00000430650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 0.367±0.31
ENST00000454673 0.045±0.00 0.148±0.00 0.101±0.00 0.066±0.04 0.085±0.03 0.031±0.02 0.097±0.00 0.032±0.00 0.149±0.00 0.012±0.00 0.015±0.01 0.021±0.00 0.080±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KD CIL_0007KD_0001 UCNEbase 2:44450120-45456944
CIL_0009CC CIL_0009CC_0001 VISTA 2:44579788-45180514
CIL_0007WX CIL_0007WX_0001 VISTA 2:44600956-45202178
CIL_0000RS CIL_0000RS_0001 CGP 2:45005161-45612165

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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