C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lin-52 DREAM MuvB core complex component
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205659 LIN52 9606 + 14:74084796-74201235 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000553404 LIN52-002 74084960-74200438 retained_intron
  ENST00000554076 LIN52-004 74084963-74114295 processed_transcript
  ENST00000554289 LIN52-005 74085505-74097860 retained_intron
  ENST00000554938 LIN52-003 74084956-74199251 protein_coding
  ENST00000555028 LIN52-001 74084796-74201235 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000553404ENST00000554076ENST00000554289ENST00000555028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000553404 N/A 0.856±0.00 0.925±0.00 1.109±0.19 1.050±0.00 N/A N/A 2.735±0.00 0.894±0.00 N/A 0.131±0.00 0.763±0.00 N/A N/A
ENST00000554076 N/A N/A 2.587±0.00 N/A N/A N/A N/A N/A N/A 2.042±0.00 N/A N/A N/A N/A
ENST00000554289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.978±0.00 N/A N/A N/A
ENST00000555028 3.110±0.00 0.584±0.00 0.473±0.00 0.750±0.07 1.796±1.21 1.221±0.59 1.127±0.37 2.892±0.00 1.636±0.00 1.780±0.00 0.986±0.00 2.324±1.56 2.061±0.19 5.806±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000234 CIL_000234_0001 CGP 14:74056850-74201235
CIL_000233 CIL_000233_0001 CGP 14:74084796-74262738

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0051726 TAS regulation of cell cycle
GO:0070176 IEA DRM complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070833 lin52 lin-52 homolog (C. elegans) protein_coding Danio_rerio
ENSMUSG00000085793 Lin52 lin-52 homolog (C. elegans) protein_coding Mus_musculus

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