C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000234_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119711-ENSG00000205659 CGP 9606 14:74056850-74201235
GeneTranscriptPositionBiotype
ENSG00000119636 (CCDC176)
coiled-coil domain containing 176 		ENST00000394009 (CCDC176-001) 74019356-74066092 protein_coding
ENST00000463558 (CCDC176-004) 74019448-74040817 protein_coding
ENST00000464394 (CCDC176-005) 74019353-74048074 protein_coding
ENST00000477986 (CCDC176-007) 74046091-74048592 retained_intron
ENST00000489323 (CCDC176-006) 74019446-74048075 processed_transcript
ENST00000492026 (CCDC176-009) 74031797-74082863 processed_transcript
ENST00000492247 (CCDC176-008) 74055533-74057459 retained_intron
ENSG00000119711 (ALDH6A1)
aldehyde dehydrogenase 6 family, member A1 		ENST00000350259 (ALDH6A1-002) 74060395-74084447 protein_coding
ENST00000553458 (ALDH6A1-001) 74056850-74084493 protein_coding
ENST00000553814 (ALDH6A1-004) 74071368-74084420 processed_transcript
ENST00000554231 (ALDH6A1-005) 74070700-74084492 retained_intron
ENST00000554501 (ALDH6A1-003) 74060247-74084449 retained_intron
ENST00000555126 (ALDH6A1-007) 74060415-74069258 protein_coding
ENST00000556852 (ALDH6A1-006) 74071878-74084447 processed_transcript
ENSG00000205659 (LIN52)
lin-52 DREAM MuvB core complex component 		ENST00000553404 (LIN52-002) 74084960-74200438 retained_intron
ENST00000554076 (LIN52-004) 74084963-74114295 processed_transcript
ENST00000554289 (LIN52-005) 74085505-74097860 retained_intron
ENST00000554938 (LIN52-003) 74084956-74199251 protein_coding
ENST00000555028 (LIN52-001) 74084796-74201235 protein_coding
ENSG00000239910 (RN7SL530P)
RNA, 7SL, cytoplasmic 530, pseudogene 		ENST00000485097 (RN7SL530P-201) 74174456-74174753 misc_RNA
ENSG00000258513 (RP5-892G5.2)
 ENST00000555526 (RP5-892G5.2-001) 74192589-74192823 transcribed_processed_pseudogene
CIL_000234_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021238-ENSMUSG00000085793 CGP 10090 12:84430723-84531533
GeneTranscriptPositionBiotype
ENSMUSG00000021238 (Aldh6a1)
aldehyde dehydrogenase family 6, subfamily A1 		ENSMUST00000085192 (Aldh6a1-201) 84430723-84450950 protein_coding
ENSMUSG00000057265 (Ccdc176)
coiled-coil domain containing 176 		ENSMUST00000081828 (Ccdc176-001) 84409071-84433780 protein_coding
ENSMUST00000151789 (Ccdc176-002) 84413264-84428421 protein_coding
ENSMUST00000153540 (Ccdc176-003) 84419974-84430380 nonsense_mediated_decay
ENSMUSG00000085793 (Lin52)
lin-52 homolog (C. elegans) 		ENSMUST00000137170 (Lin52-201) 84451508-84531533 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000234_0001ENSG00000119636ENST00000394009ENST00000463558ENST00000464394ENST00000477986ENST00000489323ENST00000492026ENST00000492247ENSG00000119711ENST00000350259ENST00000553458ENST00000553814ENST00000554231ENST00000554501ENST00000555126ENST00000556852ENSG00000205659ENST00000553404ENST00000554076ENST00000554289ENST00000554938ENST00000555028ENSG00000239910ENST00000485097ENSG00000258513ENST00000555526CIL_000234_0002ENSMUSG00000021238ENSMUST00000085192ENSMUSG00000057265ENSMUST00000081828ENSMUST00000151789ENSMUST00000153540ENSMUSG00000085793ENSMUST00000137170
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000234_0001ENSG00000119636ENST00000394009ENSG00000119711ENST00000350259ENST00000553458ENST00000555126ENSG00000205659ENST00000553404ENST00000554076ENST00000554289ENST00000555028ENSG00000239910ENST00000485097ENSG00000258513ENST00000555526CIL_000234_0002ENSMUSG00000021238ENSMUST00000085192ENSMUSG00000057265ENSMUST00000081828ENSMUSG00000085793ENSMUST00000137170
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119636 ENST00000394009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.824±14.55
ENST00000463558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119711 ENST00000350259 N/A N/A N/A 52.574±0.00 N/A N/A N/A 39.334±0.00 N/A N/A N/A N/A N/A N/A
ENST00000553458 11.314±0.00 4.572±0.00 23.961±0.00 20.145±11.17 10.000±4.13 8.107±2.43 2.831±0.00 36.497±4.86 17.944±11.90 5.803±1.27 9.605±2.15 8.037±0.51 3.220±0.30 12.828±0.00
ENST00000553814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555126 N/A N/A 23.170±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205659 ENST00000553404 N/A 0.856±0.00 0.925±0.00 1.109±0.19 1.050±0.00 N/A N/A 2.735±0.00 0.894±0.00 N/A 0.131±0.00 0.763±0.00 N/A N/A
ENST00000554076 N/A N/A 2.587±0.00 N/A N/A N/A N/A N/A N/A 2.042±0.00 N/A N/A N/A N/A
ENST00000554289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.978±0.00 N/A N/A N/A
ENST00000554938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555028 3.110±0.00 0.584±0.00 0.473±0.00 0.750±0.07 1.796±1.21 1.221±0.59 1.127±0.37 2.892±0.00 1.636±0.00 1.780±0.00 0.986±0.00 2.324±1.56 2.061±0.19 5.806±2.38
ENSG00000239910 ENST00000485097 N/A 0.063±0.00 N/A 0.071±0.00 0.067±0.00 N/A N/A N/A 1.003±0.00 N/A N/A N/A N/A N/A
ENSG00000258513 ENST00000555526 0.277±0.00 N/A N/A 0.057±0.00 N/A N/A N/A 0.056±0.00 N/A N/A N/A 0.199±0.00 0.127±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021238 ENSMUST00000085192 71.803±18.16 38.350±4.61 28.435±6.24 8.523±1.24 70.648±15.47 5.790±1.88 51.558±4.11 180.219±6.88 50.223±33.72 20.274±2.26 44.607±2.02 17.341±8.40 5.797±3.03 8.469±0.23
ENSMUSG00000057265 ENSMUST00000081828 N/A N/A N/A 6.611±0.00 N/A N/A N/A N/A N/A N/A N/A 6.785±0.00 0.762±0.00 90.327±141.06
ENSMUST00000151789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085793 ENSMUST00000137170 5.259±0.85 2.983±0.32 8.221±0.60 8.358±1.88 4.217±1.27 2.519±0.35 3.487±1.27 7.638±0.56 4.452±2.54 5.955±0.47 3.799±0.80 3.567±0.63 3.176±0.83 6.879±2.33

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