C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hemoglobin, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206172 HBA1 9606 + 16:176680-177522 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320868 HBA1-001 176680-177522 protein_coding
  ENST00000397797 HBA1-006 176704-177522 protein_coding
  ENST00000472694 HBA1-002 176698-177520 retained_intron
  ENST00000487791 HBA1-005 176748-177274 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397797 134.075±0.00 32.943±0.00 3.868±0.00 7.933±5.28 158.203±150.99 371.750±371.39 3.868±2.79 0.255±0.00 4.076±1.77 6.166±0.00 1.445±0.51 4.580±5.28 783.651±496.62 113.699±111.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801
CIL_0003GE CIL_0003GE_0001 CGP 16:176680-181181

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004601 IDA peroxidase activity
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005829 TAS cytosol
GO:0005833 IEA:IDA hemoglobin complex
GO:0010942 IDA positive regulation of cell death
GO:0015671 IEA:TAS oxygen transport
GO:0015701 TAS bicarbonate transport
GO:0016020 IDA membrane
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0031720 IDA haptoglobin binding
GO:0031838 IDA haptoglobin-hemoglobin complex
GO:0042542 IDA response to hydrogen peroxide
GO:0042744 IDA hydrogen peroxide catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051291 IDA protein heterooligomerization
GO:0055114 IDA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0071682 TAS endocytic vesicle lumen
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000069917 Hba-a2 hemoglobin alpha, adult chain 2 protein_coding Mus_musculus
ENSMUSG00000069919 Hba-a1 hemoglobin alpha, adult chain 1 protein_coding Mus_musculus

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