C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206560 ANKRD28 9606 - 3:15667236-15859771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000383777 ANKRD28-201 15667236-15756551 protein_coding
  ENST00000399451 ANKRD28-003 15667236-15859771 protein_coding
  ENST00000412318 ANKRD28-001 15667239-15859422 nonsense_mediated_decay
  ENST00000439830 ANKRD28-002 15737039-15859469 nonsense_mediated_decay
  ENST00000451422 ANKRD28-007 15677536-15796506 nonsense_mediated_decay
  ENST00000460278 ANKRD28-010 15724397-15756548 processed_transcript
  ENST00000461696 ANKRD28-009 15781437-15797979 processed_transcript
  ENST00000462657 ANKRD28-013 15689840-15696231 retained_intron
  ENST00000463533 ANKRD28-014 15679301-15686453 retained_intron
  ENST00000476472 ANKRD28-011 15721101-15756547 processed_transcript
  ENST00000479043 ANKRD28-015 15676596-15677606 retained_intron
  ENST00000492895 ANKRD28-012 15709668-15721122 processed_transcript
  ENST00000497037 ANKRD28-004 15670110-15798184 processed_transcript
  ENST00000498524 ANKRD28-006 15683742-15796826 retained_intron
  ENST00000498713 ANKRD28-008 15669792-15676223 processed_transcript
  ENST00000624145 ANKRD28-202 15667236-15798184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000383777ENST00000399451ENST00000412318ENST00000451422ENST00000461696ENST00000463533ENST00000497037ENST00000498524ENST00000498713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000383777 N/A 0.925±0.00 N/A N/A 1.341±0.00 1.125±0.00 N/A 2.017±0.00 0.520±0.00 2.065±0.00 N/A 1.272±0.06 0.581±0.00 6.882±0.15
ENST00000399451 5.097±0.00 1.213±0.00 N/A 5.556±0.00 2.616±0.00 2.668±0.22 2.912±0.75 2.195±0.14 1.612±0.13 1.793±0.40 5.443±4.50 2.145±1.55 1.706±0.00 1.378±0.00
ENST00000412318 N/A N/A N/A N/A N/A N/A N/A 1.393±0.00 N/A 0.954±0.00 4.383±2.54 1.619±0.71 0.782±0.08 N/A
ENST00000451422 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.743±0.00 3.971±0.00 N/A 2.101±0.00 N/A
ENST00000461696 N/A N/A N/A N/A N/A 4.183±0.00 N/A N/A N/A 5.691±0.00 4.455±0.00 8.787±0.00 N/A N/A
ENST00000463533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.523±0.00 8.775±0.00 46.182±0.00
ENST00000497037 N/A N/A N/A N/A N/A 2.412±0.00 N/A N/A N/A N/A N/A N/A N/A 6.860±0.00
ENST00000498524 N/A N/A 1.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498713 N/A N/A 7.650±0.00 N/A N/A 10.427±0.00 N/A N/A 6.931±0.00 6.447±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A8 CIL_0005A8_0001 CGP 3:15601341-15859771
CIL_0005A7 CIL_0005A7_0001 CGP 3:15667236-16231992

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009023 ankrd28b ankyrin repeat domain 28b protein_coding Danio_rerio
ENSDARG00000086326 CABZ01071939.1 ankyrin repeat domain 28 protein_coding Danio_rerio
ENSMUSG00000014496 Ankrd28 ankyrin repeat domain 28 protein_coding Mus_musculus

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