C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005A8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169814-ENSG00000206560 CGP 9606 3:15601341-15859771
GeneTranscriptPositionBiotype
ENSG00000131373 (HACL1)
2-hydroxyacyl-CoA lyase 1 		ENST00000321169 (HACL1-001) 15560704-15601831 protein_coding
ENST00000383779 (HACL1-006) 15560746-15601557 nonsense_mediated_decay
ENST00000414979 (HACL1-009) 15582878-15601561 protein_coding
ENST00000421993 (HACL1-008) 15579900-15601592 protein_coding
ENST00000422591 (HACL1-004) 15563358-15601569 nonsense_mediated_decay
ENST00000435217 (HACL1-003) 15560716-15601569 protein_coding
ENST00000451445 (HACL1-002) 15560746-15601587 protein_coding
ENST00000456194 (HACL1-005) 15560747-15601569 protein_coding
ENST00000457447 (HACL1-007) 15560807-15601569 protein_coding
ENST00000460907 (HACL1-010) 15596152-15601569 retained_intron
ENST00000469454 (HACL1-012) 15595915-15601185 retained_intron
ENST00000472857 (HACL1-011) 15600801-15601546 retained_intron
ENSG00000169814 (BTD)
biotinidase 		ENST00000303498 (BTD-001) 15601742-15645822 protein_coding
ENST00000383778 (BTD-201) 15601969-15645819 protein_coding
ENST00000417015 (BTD-006) 15601387-15635456 nonsense_mediated_decay
ENST00000427382 (BTD-004) 15601341-15635615 protein_coding
ENST00000436193 (BTD-009) 15601969-15644670 protein_coding
ENST00000437172 (BTD-003) 15601801-15645715 protein_coding
ENST00000449107 (BTD-002) 15601633-15645582 protein_coding
ENST00000467027 (BTD-010) 15601801-15635614 processed_transcript
ENST00000471964 (BTD-008) 15601771-15635429 processed_transcript
ENST00000480711 (BTD-007) 15601748-15606752 processed_transcript
ENST00000482824 (BTD-011) 15630002-15642167 processed_transcript
ENST00000494021 (BTD-005) 15601370-15635580 processed_transcript
ENSG00000206560 (ANKRD28)
ankyrin repeat domain 28 		ENST00000383777 (ANKRD28-201) 15667236-15756551 protein_coding
ENST00000399451 (ANKRD28-003) 15667236-15859771 protein_coding
ENST00000412318 (ANKRD28-001) 15667239-15859422 nonsense_mediated_decay
ENST00000439830 (ANKRD28-002) 15737039-15859469 nonsense_mediated_decay
ENST00000451422 (ANKRD28-007) 15677536-15796506 nonsense_mediated_decay
ENST00000460278 (ANKRD28-010) 15724397-15756548 processed_transcript
ENST00000461696 (ANKRD28-009) 15781437-15797979 processed_transcript
ENST00000462657 (ANKRD28-013) 15689840-15696231 retained_intron
ENST00000463533 (ANKRD28-014) 15679301-15686453 retained_intron
ENST00000476472 (ANKRD28-011) 15721101-15756547 processed_transcript
ENST00000479043 (ANKRD28-015) 15676596-15677606 retained_intron
ENST00000492895 (ANKRD28-012) 15709668-15721122 processed_transcript
ENST00000497037 (ANKRD28-004) 15670110-15798184 processed_transcript
ENST00000498524 (ANKRD28-006) 15683742-15796826 retained_intron
ENST00000498713 (ANKRD28-008) 15669792-15676223 processed_transcript
ENST00000624145 (ANKRD28-202) 15667236-15798184 protein_coding
ENSG00000263740 (RN7SL4P)
RNA, 7SL, cytoplasmic 4, pseudogene 		ENST00000584058 (RN7SL4P-201) 15738515-15738809 misc_RNA
ENSG00000264354 (MIR3134)
microRNA 3134 		ENST00000579433 (MIR3134-201) 15697298-15697371 miRNA
ENSG00000270409 (RP11-44D5.1)
 ENST00000604625 (RP11-44D5.1-001) 15732252-15733404 transcribed_unprocessed_pseudogene
ENST00000605733 (RP11-44D5.1-002) 15732827-15733470 processed_transcript
ENSG00000279465 (RP11-44D5.2)
 ENST00000624280 (RP11-44D5.2-001) 15731877-15732536 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0005A8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021900-ENSMUSG00000014496 CGP 10090 14:31641028-31830415
GeneTranscriptPositionBiotype
ENSMUSG00000014496 (Ankrd28)
ankyrin repeat domain 28 		ENSMUST00000014640 (Ankrd28-201) 31700015-31830415 protein_coding
ENSMUSG00000021884 (Hacl1)
2-hydroxyacyl-CoA lyase 1 		ENSMUST00000022437 (Hacl1-001) 31607226-31640964 protein_coding
ENSMUST00000127204 (Hacl1-005) 31608011-31640912 protein_coding
ENSMUST00000128629 (Hacl1-006) 31629767-31641257 nonsense_mediated_decay
ENSMUST00000134626 (Hacl1-004) 31626426-31641172 nonsense_mediated_decay
ENSMUST00000135751 (Hacl1-009) 31635648-31641286 retained_intron
ENSMUST00000139501 (Hacl1-010) 31607969-31610334 processed_transcript
ENSMUST00000140078 (Hacl1-003) 31607665-31614317 processed_transcript
ENSMUST00000155210 (Hacl1-007) 31630579-31640946 retained_intron
ENSMUST00000156189 (Hacl1-008) 31635509-31640911 retained_intron
ENSMUST00000156431 (Hacl1-002) 31598730-31640944 nonsense_mediated_decay
ENSMUST00000165955 (Hacl1-012) 31608011-31640878 nonsense_mediated_decay
ENSMUST00000167066 (Hacl1-011) 31608011-31640878 protein_coding
ENSMUST00000167175 (Hacl1-014) 31552905-31640878 nonsense_mediated_decay
ENSMUST00000171414 (Hacl1-013) 31608011-31640878 nonsense_mediated_decay
ENSMUSG00000021900 (Btd)
biotinidase 		ENSMUST00000090147 (Btd-001) 31641057-31668579 protein_coding
ENSMUST00000128014 (Btd-002) 31641028-31667171 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A8_0001ENSG00000131373ENST00000321169ENST00000383779ENST00000422591ENST00000435217ENST00000451445ENST00000456194ENSG00000169814ENST00000303498ENST00000383778ENST00000417015ENST00000449107ENST00000480711ENST00000482824ENSG00000206560ENST00000383777ENST00000399451ENST00000412318ENST00000451422ENST00000461696ENST00000463533ENST00000497037ENST00000498524ENST00000498713ENSG00000263740ENST00000584058ENSG00000264354ENST00000579433ENSG00000270409ENST00000604625ENST00000605733ENSG00000279465ENST00000624280CIL_0005A8_0002ENSMUSG00000014496ENSMUST00000014640ENSMUSG00000021884ENSMUST00000022437ENSMUST00000127204ENSMUST00000165955ENSMUST00000167066ENSMUSG00000021900ENSMUST00000090147ENSMUST00000128014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131373 ENST00000321169 N/A N/A N/A N/A N/A 1.498±0.00 0.337±0.00 N/A 0.598±0.00 N/A N/A 3.611±0.00 N/A N/A
ENST00000383779 N/A 3.458±0.00 N/A 2.419±0.00 N/A N/A N/A N/A 4.692±0.00 N/A N/A N/A N/A N/A
ENST00000414979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422591 N/A 6.108±0.00 N/A 4.627±0.00 10.449±0.00 2.384±0.00 N/A 4.224±0.00 N/A 1.611±0.00 3.602±0.00 2.605±0.00 4.308±0.00 9.142±3.47
ENST00000435217 N/A N/A N/A 3.384±0.00 N/A N/A N/A N/A N/A 3.530±0.00 N/A 2.896±0.00 N/A 15.953±0.00
ENST00000451445 3.991±0.00 N/A N/A N/A 1.698±0.00 1.273±0.00 1.891±0.00 2.469±0.00 3.958±2.14 2.406±0.00 3.609±2.35 N/A 5.016±0.00 N/A
ENST00000456194 4.038±0.00 3.718±0.00 N/A N/A N/A N/A 1.872±0.00 9.362±0.00 4.732±0.00 N/A N/A 1.278±0.37 3.748±0.13 5.830±0.00
ENST00000457447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169814 ENST00000303498 8.088±0.00 N/A N/A 2.357±0.04 6.019±4.54 4.448±3.78 4.069±0.00 8.023±1.62 7.356±5.36 4.043±0.00 0.985±0.00 6.017±3.15 11.793±2.39 5.120±0.00
ENST00000383778 N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A 7.414±3.08
ENST00000417015 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.693±0.00 N/A N/A N/A N/A
ENST00000427382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449107 N/A N/A N/A N/A 10.482±0.00 N/A 0.688±0.00 N/A N/A N/A 0.584±0.00 N/A N/A 5.640±0.00
ENST00000467027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.380±0.00 N/A N/A N/A
ENST00000482824 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.124±0.00 N/A N/A N/A N/A
ENST00000494021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206560 ENST00000383777 N/A 0.925±0.00 N/A N/A 1.341±0.00 1.125±0.00 N/A 2.017±0.00 0.520±0.00 2.065±0.00 N/A 1.272±0.06 0.581±0.00 6.882±0.15
ENST00000399451 5.097±0.00 1.213±0.00 N/A 5.556±0.00 2.616±0.00 2.668±0.22 2.912±0.75 2.195±0.14 1.612±0.13 1.793±0.40 5.443±4.50 2.145±1.55 1.706±0.00 1.378±0.00
ENST00000412318 N/A N/A N/A N/A N/A N/A N/A 1.393±0.00 N/A 0.954±0.00 4.383±2.54 1.619±0.71 0.782±0.08 N/A
ENST00000439830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451422 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.743±0.00 3.971±0.00 N/A 2.101±0.00 N/A
ENST00000460278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461696 N/A N/A N/A N/A N/A 4.183±0.00 N/A N/A N/A 5.691±0.00 4.455±0.00 8.787±0.00 N/A N/A
ENST00000462657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.523±0.00 8.775±0.00 46.182±0.00
ENST00000476472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497037 N/A N/A N/A N/A N/A 2.412±0.00 N/A N/A N/A N/A N/A N/A N/A 6.860±0.00
ENST00000498524 N/A N/A 1.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498713 N/A N/A 7.650±0.00 N/A N/A 10.427±0.00 N/A N/A 6.931±0.00 6.447±0.00 N/A N/A N/A N/A
ENST00000624145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263740 ENST00000584058 0.089±0.00 1.537±0.00 91.402±0.00 0.687±0.00 0.317±0.00 93.947±93.76 26.562±26.18 111.593±111.38 285.137±0.00 85.013±0.00 194.785±0.00 38.010±0.00 N/A 0.181±0.00
ENSG00000264354 ENST00000579433 N/A N/A N/A 1.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270409 ENST00000604625 N/A N/A 0.450±0.00 0.161±0.00 N/A 0.096±0.00 0.037±0.02 0.290±0.00 0.176±0.00 0.064±0.00 N/A 0.075±0.05 0.031±0.00 N/A
ENST00000605733 0.172±0.00 0.447±0.00 N/A 0.513±0.00 0.391±0.00 0.096±0.07 0.164±0.00 0.159±0.00 0.260±0.00 0.153±0.00 0.039±0.00 0.151±0.07 0.041±0.00 0.182±0.10
ENSG00000279465 ENST00000624280 0.043±0.00 0.157±0.00 0.157±0.00 N/A 0.216±0.00 0.306±0.00 N/A 0.156±0.00 0.402±0.00 0.145±0.00 0.077±0.00 0.104±0.05 N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014496 ENSMUST00000014640 3.650±1.32 2.252±0.47 1.239±0.38 5.203±3.50 2.999±0.42 2.852±0.76 3.147±0.64 4.004±0.31 2.104±1.09 2.815±1.38 2.761±0.85 3.821±1.17 3.582±1.92 3.036±1.20
ENSMUSG00000021884 ENSMUST00000022437 6.096±0.00 N/A 3.431±0.01 N/A N/A N/A N/A 15.962±2.89 51.849±37.75 N/A 1.161±0.19 N/A N/A 2.409±0.08
ENSMUST00000127204 13.957±4.81 N/A 4.374±0.51 N/A 11.116±0.00 N/A N/A 34.664±12.08 38.075±22.42 N/A 2.085±0.30 9.072±0.00 2.566±0.00 4.405±2.02
ENSMUST00000128629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165955 N/A N/A N/A 1.739±0.00 N/A N/A N/A N/A N/A N/A 2.786±0.00 N/A 2.663±0.57 N/A
ENSMUST00000167066 N/A N/A N/A N/A N/A N/A N/A 34.064±12.27 169.398±10.62 N/A N/A 5.148±0.00 N/A 1.739±0.00
ENSMUST00000167175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021900 ENSMUST00000090147 25.278±4.75 35.907±2.25 8.572±2.75 4.527±2.16 23.569±8.48 9.635±2.05 5.807±0.62 50.769±8.92 32.509±20.89 17.152±1.64 2.987±0.63 26.124±10.01 11.221±6.14 3.585±1.64
ENSMUST00000128014 N/A N/A N/A N/A 37.515±10.87 N/A N/A N/A 10.081±0.00 N/A N/A N/A N/A N/A

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