C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 48 (heme transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211584 SLC48A1 9606 + 12:47753916-47782753 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000442218 SLC48A1-001 47773208-47782753 protein_coding
  ENST00000442892 SLC48A1-002 47771587-47782751 protein_coding
  ENST00000461620 SLC48A1-004 47778355-47779193 processed_transcript
  ENST00000476104 SLC48A1-005 47778366-47779192 processed_transcript
  ENST00000547002 SLC48A1-007 47758578-47780307 protein_coding
  ENST00000548498 SLC48A1-008 47753916-47779171 protein_coding
  ENST00000549243 SLC48A1-009 47758994-47779111 protein_coding
  ENST00000551301 SLC48A1-006 47773215-47780824 nonsense_mediated_decay
  ENST00000552003 SLC48A1-010 47753930-47756485 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000442218
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000442218 26.369±0.00 17.925±0.00 5.209±0.00 43.840±22.78 29.579±0.00 10.406±7.36 14.759±0.00 40.181±38.00 6.250±0.87 15.236±12.31 27.396±0.00 43.339±11.46 18.825±3.65 13.399±5.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YT CIL_0005YT_0001 CGP 12:47709734-47771040
CIL_0002OC CIL_0002OC_0001 CGP 12:47734672-47782753
CIL_0003DF CIL_0003DF_0002 CGP 12:47753916-47833132

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0015232 IEA heme transporter activity
GO:0015886 IMP heme transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026109 slc48a1b solute carrier family 48 (heme transporter), member 1b protein_coding Danio_rerio
ENSDARG00000026907 slc48a1a solute carrier family 48 (heme transporter), member 1a protein_coding Danio_rerio
ENSMUSG00000081534 Slc48a1 solute carrier family 48 (heme transporter), member 1 protein_coding Mus_musculus

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