C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111405-ENSG00000079337 CGP 9606 12:47709734-47771040
GeneTranscriptPositionBiotype
ENSG00000111405 (ENDOU)
endonuclease, polyU-specific 		ENST00000229003 (ENDOU-001) 47709734-47725567 protein_coding
ENST00000422538 (ENDOU-002) 47709745-47725536 protein_coding
ENST00000545824 (ENDOU-003) 47710454-47725534 protein_coding
ENST00000551186 (ENDOU-004) 47716379-47717879 retained_intron
ENSG00000211584 (SLC48A1)
solute carrier family 48 (heme transporter), member 1 		ENST00000442218 (SLC48A1-001) 47773208-47782753 protein_coding
ENST00000442892 (SLC48A1-002) 47771587-47782751 protein_coding
ENST00000461620 (SLC48A1-004) 47778355-47779193 processed_transcript
ENST00000476104 (SLC48A1-005) 47778366-47779192 processed_transcript
ENST00000547002 (SLC48A1-007) 47758578-47780307 protein_coding
ENST00000548498 (SLC48A1-008) 47753916-47779171 protein_coding
ENST00000549243 (SLC48A1-009) 47758994-47779111 protein_coding
ENST00000551301 (SLC48A1-006) 47773215-47780824 nonsense_mediated_decay
ENST00000552003 (SLC48A1-010) 47753930-47756485 retained_intron
ENSG00000274902 (RP1-197B17.4)
 ENST00000614562 (RP1-197B17.4-001) 47731908-47732351 lincRNA
ENSG00000277173 (CTD-2024F21.1)
 ENST00000622792 (CTD-2024F21.1-001) 47768529-47769648 sense_intronic
CIL_0005YT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022468-ENSMUSG00000022469 CGP 10090 15:97711019-97767972
GeneTranscriptPositionBiotype
ENSMUSG00000022468 (Endou)
endonuclease, polyU-specific 		ENSMUST00000023105 (Endou-201) 97711019-97721150 protein_coding
ENSMUST00000100249 (Endou-202) 97711019-97731405 protein_coding
ENSMUSG00000022469 (Rapgef3)
Rap guanine nucleotide exchange factor (GEF) 3 		ENSMUST00000123397 (Rapgef3-004) 97746528-97767587 retained_intron
ENSMUST00000125002 (Rapgef3-016) 97745368-97748872 retained_intron
ENSMUST00000126854 (Rapgef3-005) 97744770-97767846 protein_coding
ENSMUST00000128775 (Rapgef3-003) 97744956-97767664 protein_coding
ENSMUST00000129223 (Rapgef3-001) 97744953-97767798 protein_coding
ENSMUST00000134371 (Rapgef3-013) 97757454-97758842 nonsense_mediated_decay
ENSMUST00000134885 (Rapgef3-002) 97745168-97767666 protein_coding
ENSMUST00000135080 (Rapgef3-006) 97766859-97767972 protein_coding
ENSMUST00000142196 (Rapgef3-011) 97760697-97761854 retained_intron
ENSMUST00000146214 (Rapgef3-014) 97750357-97757502 retained_intron
ENSMUST00000146620 (Rapgef3-008) 97760674-97767264 protein_coding
ENSMUST00000149419 (Rapgef3-009) 97759359-97767046 nonsense_mediated_decay
ENSMUST00000153241 (Rapgef3-012) 97758897-97760425 processed_transcript
ENSMUST00000153464 (Rapgef3-010) 97759364-97761879 processed_transcript
ENSMUST00000155810 (Rapgef3-015) 97749707-97750705 retained_intron
ENSMUST00000175894 (Rapgef3-018) 97745285-97767420 nonsense_mediated_decay
ENSMUST00000177352 (Rapgef3-007) 97745016-97767062 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YT_0001ENSG00000111405ENST00000229003ENST00000422538ENST00000545824ENST00000551186ENSG00000211584ENST00000442218ENST00000442892ENST00000461620ENST00000476104ENST00000547002ENST00000548498ENST00000549243ENST00000551301ENST00000552003ENSG00000274902ENST00000614562ENSG00000277173ENST00000622792CIL_0005YT_0002ENSMUSG00000022468ENSMUST00000023105ENSMUST00000100249ENSMUSG00000022469ENSMUST00000123397ENSMUST00000125002ENSMUST00000126854ENSMUST00000128775ENSMUST00000129223ENSMUST00000134371ENSMUST00000134885ENSMUST00000135080ENSMUST00000142196ENSMUST00000146214ENSMUST00000146620ENSMUST00000149419ENSMUST00000153241ENSMUST00000153464ENSMUST00000155810ENSMUST00000175894ENSMUST00000177352
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YT_0001ENSG00000111405ENST00000229003ENSG00000211584ENST00000442218ENSG00000274902ENST00000614562ENSG00000277173ENST00000622792CIL_0005YT_0002ENSMUSG00000022468ENSMUST00000023105ENSMUST00000100249ENSMUSG00000022469ENSMUST00000123397ENSMUST00000126854ENSMUST00000128775ENSMUST00000129223ENSMUST00000134885ENSMUST00000175894ENSMUST00000177352
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111405 ENST00000229003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.735±0.00 N/A
ENST00000422538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211584 ENST00000442218 26.369±0.00 17.925±0.00 5.209±0.00 43.840±22.78 29.579±0.00 10.406±7.36 14.759±0.00 40.181±38.00 6.250±0.87 15.236±12.31 27.396±0.00 43.339±11.46 18.825±3.65 13.399±5.11
ENST00000442892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274902 ENST00000614562 0.573±0.00 0.372±0.00 N/A 1.548±0.00 1.250±0.00 0.136±0.00 0.128±0.00 0.709±0.00 0.082±0.00 N/A N/A 0.501±0.27 0.225±0.06 0.172±0.00
ENSG00000277173 ENST00000622792 0.054±0.00 0.011±0.00 0.157±0.00 0.034±0.00 0.129±0.00 0.109±0.00 0.134±0.08 0.043±0.00 N/A 0.029±0.00 N/A 0.122±0.08 0.032±0.01 0.024±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022468 ENSMUST00000023105 0.222±0.09 0.182±0.08 N/A N/A 0.360±0.15 0.293±0.09 N/A 0.238±0.00 0.109±0.07 N/A N/A 0.321±0.17 N/A 0.052±0.00
ENSMUST00000100249 0.301±0.04 0.336±0.04 N/A 0.301±0.07 0.629±0.19 0.106±0.00 0.409±0.12 0.410±0.15 0.016±0.00 3.668±3.29 0.215±0.11 0.254±0.09 9.321±12.58 0.353±0.08
ENSMUSG00000022469 ENSMUST00000123397 3.836±1.54 2.525±0.59 1.068±0.04 0.825±0.15 1.879±0.49 2.159±0.00 2.188±0.29 N/A 0.244±0.07 N/A 0.660±0.11 2.232±0.27 1.351±0.84 1.038±0.23
ENSMUST00000125002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126854 1.640±0.00 4.037±1.93 0.964±0.00 N/A 1.839±0.00 2.482±0.03 N/A N/A 0.267±0.05 N/A 0.496±0.00 2.167±0.33 1.012±0.10 1.893±0.23
ENSMUST00000128775 N/A N/A N/A 2.089±0.00 0.790±0.00 2.394±0.08 N/A N/A 0.212±0.06 N/A 1.020±0.19 2.217±1.14 N/A N/A
ENSMUST00000129223 3.492±1.47 N/A 1.206±0.41 1.208±0.11 2.441±0.77 2.644±0.82 2.221±0.09 10.162±0.48 0.348±0.13 8.489±1.42 0.584±0.07 3.047±0.89 2.905±1.73 1.006±0.11
ENSMUST00000134371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134885 N/A N/A N/A N/A N/A N/A N/A N/A 0.794±0.00 N/A 1.949±0.01 N/A N/A N/A
ENSMUST00000135080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175894 3.155±0.00 4.989±1.91 N/A N/A 4.431±0.88 5.350±1.89 N/A N/A 0.333±0.07 8.435±0.00 N/A 2.486±0.00 5.677±5.23 N/A
ENSMUST00000177352 4.751±1.09 5.933±0.52 N/A N/A 4.759±1.80 8.771±1.93 3.925±0.49 11.908±1.53 0.674±0.16 12.133±3.43 1.443±0.31 8.621±1.95 2.383±0.14 1.420±0.00

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