C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: limb bud and heart development
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213626 LBH 9606 + 2:30231531-30323730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000395323 LBH-001 30231531-30260028 protein_coding
  ENST00000401506 LBH-007 30232153-30257760 protein_coding
  ENST00000404397 LBH-006 30231537-30323730 protein_coding
  ENST00000406087 LBH-003 30231537-30257656 protein_coding
  ENST00000407930 LBH-008 30232180-30257670 protein_coding
  ENST00000412933 LBH-004 30231536-30257548 nonsense_mediated_decay
  ENST00000464412 LBH-005 30231537-30256701 processed_transcript
  ENST00000467242 LBH-002 30232157-30258040 processed_transcript
  ENST00000484150 LBH-009 30234266-30257700 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395323ENST00000407930ENST00000484150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395323 10.881±0.00 45.934±0.00 4.659±0.00 2.683±1.24 10.465±4.12 6.614±1.86 25.054±14.21 8.379±7.00 3.761±0.93 38.046±20.20 3.069±1.66 43.637±47.24 37.428±14.06 14.772±9.39
ENST00000407930 N/A N/A N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A N/A
ENST00000484150 N/A N/A N/A N/A N/A N/A N/A 3.558±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099K CIL_00099K_0001 VISTA 2:30059340-30663789
CIL_0000VH CIL_0000VH_0001 CGP 2:30146941-30323730
CIL_0000VG CIL_0000VG_0001 CGP 2:30231531-30644225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0010468 IMP regulation of gene expression
GO:0030193 IMP regulation of blood coagulation
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087377 LBH limb bud and heart development protein_coding Danio_rerio
ENSMUSG00000024063 Lbh limb-bud and heart protein_coding Mus_musculus

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