C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 90
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213988 ZNF90 9606 + 19:20077994-20127076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000418063 ZNF90-001 20078021-20119752 protein_coding
  ENST00000434475 ZNF90-201 20124993-20125534 protein_coding
  ENST00000469078 ZNF90-002 20077994-20127018 nonsense_mediated_decay
  ENST00000473524 ZNF90-005 20078005-20118044 nonsense_mediated_decay
  ENST00000474284 ZNF90-003 20077994-20127076 processed_transcript
  ENST00000484032 ZNF90-006 20120824-20125143 retained_intron
  ENST00000492328 ZNF90-004 20078037-20080319 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000418063ENST00000434475ENST00000469078ENST00000473524ENST00000474284ENST00000484032ENST00000492328
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000418063 0.082±0.00 0.464±0.00 0.061±0.00 0.285±0.19 0.215±0.07 0.080±0.00 0.212±0.02 0.476±0.00 N/A N/A 0.330±0.05 0.206±0.00 0.218±0.08
ENST00000434475 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.438±0.00 N/A N/A N/A
ENST00000469078 N/A 0.879±0.00 N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A 0.757±0.54 0.385±0.00
ENST00000473524 N/A N/A 0.436±0.00 1.109±0.00 N/A 0.309±0.00 N/A N/A 1.142±0.00 0.328±0.00 0.856±0.25 N/A N/A
ENST00000474284 0.415±0.00 N/A N/A 0.294±0.00 0.539±0.00 0.129±0.00 0.477±0.00 0.586±0.00 0.574±0.00 N/A 0.484±0.00 N/A 0.265±0.00
ENST00000484032 N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.00
ENST00000492328 N/A N/A N/A N/A N/A 0.977±0.00 N/A N/A 1.984±0.00 N/A N/A N/A 3.504±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005840 IEA ribosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006412 IEA translation
GO:0008270 NAS zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076108 zgc:194336 zgc:194336 protein_coding Danio_rerio
ENSDARG00000088352 si:ch211-271g18.3 si:ch211-271g18.3 protein_coding Danio_rerio
ENSDARG00000089537 CABZ01079304.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090942 CABZ01054394.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093134 CR388165.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096851 si:dkey-111k8.6 si:dkey-111k8.6 protein_coding Danio_rerio
ENSMUSG00000057842 Zfp595 zinc finger protein 595 protein_coding Mus_musculus

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