C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger protein 90
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469078 ZNF90-002 ENSG00000213988 9606 + 19:20077994-20127018 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalMusclePlacentaTestisENST00000469078
Transcript ID Adrenal Muscle Placenta Testis
ENST00000469078 0.879±0.00 0.239±0.00 0.757±0.54 0.385±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082134 Rps16-001 protein_coding Mus_musculus 0 547
ENSMUST00000140155 Rps16-ps2-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000071573 Gm8623-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000155805 Rps16-003 processed_transcript Mus_musculus 0 477
ENSMUST00000152918 Rps16-002 retained_intron Mus_musculus 0 257
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.00000006 64

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