C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: notochord homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214513 NOTO 9606 + 2:73202258-73212513 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398468 NOTO-001 73202258-73212513 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000398468
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000398468 0.087±0.00 0.172±0.00 0.070±0.00 0.007±0.00 0.026±0.00 0.026±0.02 0.113±0.00 0.024±0.00 0.013±0.00 0.109±0.00 0.007±0.00 0.101±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EE CIL_0003EE_0001 CGP 2:73073382-73212513
CIL_0003EF CIL_0003EF_0001 CGP 2:73202258-73227237

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007368 IEA determination of left/right symmetry
GO:0009880 IEA embryonic pattern specification
GO:0009953 IEA dorsal/ventral pattern formation
GO:0030903 IEA notochord development
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000068302 Noto notochord homolog (Xenopus laevis) protein_coding Mus_musculus

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