C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, SWIM-type containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214655 ZSWIM8 9606 + 10:73785582-73801797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398706 ZSWIM8-201 73785624-73801797 protein_coding
  ENST00000412198 ZSWIM8-015 73792731-73801792 protein_coding
  ENST00000425051 ZSWIM8-001 73793884-73796360 processed_transcript
  ENST00000431225 ZSWIM8-020 73792050-73794943 processed_transcript
  ENST00000433366 ZSWIM8-021 73785683-73801608 nonsense_mediated_decay
  ENST00000446546 ZSWIM8-013 73785655-73786679 retained_intron
  ENST00000451629 ZSWIM8-022 73789502-73790256 processed_transcript
  ENST00000466354 ZSWIM8-003 73800719-73801793 protein_coding
  ENST00000466568 ZSWIM8-002 73800907-73801492 processed_transcript
  ENST00000487278 ZSWIM8-011 73796371-73797450 processed_transcript
  ENST00000489234 ZSWIM8-009 73794013-73796351 processed_transcript
  ENST00000492395 ZSWIM8-005 73791324-73801793 nonsense_mediated_decay
  ENST00000603114 ZSWIM8-018 73785624-73801792 protein_coding
  ENST00000603187 ZSWIM8-014 73792522-73801792 protein_coding
  ENST00000603195 ZSWIM8-026 73799310-73800795 processed_transcript
  ENST00000603309 ZSWIM8-025 73800122-73801432 processed_transcript
  ENST00000603409 ZSWIM8-023 73799062-73801166 processed_transcript
  ENST00000603840 ZSWIM8-017 73799633-73800894 processed_transcript
  ENST00000604165 ZSWIM8-024 73799074-73800935 processed_transcript
  ENST00000604524 ZSWIM8-019 73785656-73801793 protein_coding
  ENST00000604729 ZSWIM8-027 73785582-73801792 protein_coding
  ENST00000604754 ZSWIM8-016 73792759-73801581 protein_coding
  ENST00000605216 ZSWIM8-012 73785662-73801792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000398706ENST00000412198ENST00000425051ENST00000433366ENST00000603114ENST00000604524ENST00000604729ENST00000605216
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000398706 N/A N/A N/A N/A 1.558±0.00 N/A 2.741±0.00 2.324±0.00 N/A 3.266±0.00 N/A
ENST00000412198 N/A N/A 1.482±0.00 N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A
ENST00000425051 N/A N/A N/A N/A N/A N/A 16.410±0.00 N/A 5.858±0.00 N/A N/A
ENST00000433366 N/A N/A N/A 3.078±0.48 N/A N/A 7.300±0.00 N/A N/A 3.331±0.00 N/A
ENST00000603114 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.931±0.00 4.181±0.00
ENST00000604524 N/A 2.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604729 8.099±0.00 2.080±0.00 5.380±0.00 4.303±0.00 2.795±1.87 4.406±0.00 N/A 2.020±0.35 N/A 6.016±2.98 5.139±1.82
ENST00000605216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GZ CIL_0001GZ_0001 CGP 10:73782047-73801797
CIL_0006BH CIL_0006BH_0002 CGP 10:73785582-73811651

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069397 zswim8 zinc finger, SWIM-type containing 8 protein_coding Danio_rerio
ENSMUSG00000021819 Zswim8 zinc finger SWIM-type containing 8 protein_coding Mus_musculus

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