C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069397-ENSDARG00000086269 CGP 7955 13:21966308-22235071
GeneTranscriptPositionBiotype
ENSDARG00000069397 (zswim8)
zinc finger, SWIM-type containing 8 		ENSDART00000056432 (zswim8-001) 21966308-22025774 protein_coding
ENSDART00000100965 (zswim8-002) 22014322-22025769 processed_transcript
ENSDART00000133108 (zswim8-003) 22002262-22004926 protein_coding
ENSDART00000144612 (zswim8-004) 22010481-22011376 protein_coding
ENSDARG00000084398 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119798 (5S_rRNA.653-201) 22190395-22190521 rRNA
ENSDARG00000085094 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120494 (5S_rRNA.998-201) 22093883-22093999 rRNA
ENSDARG00000086269 (ndst2a)
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a 		ENSDART00000125149 (ndst2a-201) 22205421-22235071 protein_coding
CIL_0006BH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214655-ENSG00000272916 CGP 9606 10:73785582-73811651
GeneTranscriptPositionBiotype
ENSG00000166507 (NDST2)
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 		ENST00000299641 (NDST2-201) 73801911-73808731 protein_coding
ENST00000309979 (NDST2-003) 73801911-73811584 protein_coding
ENST00000398701 (NDST2-008) 73810684-73811798 processed_transcript
ENST00000429742 (NDST2-001) 73802596-73803344 protein_coding
ENST00000463410 (NDST2-004) 73806876-73807524 processed_transcript
ENST00000465929 (NDST2-002) 73808467-73809076 processed_transcript
ENSG00000214655 (ZSWIM8)
zinc finger, SWIM-type containing 8 		ENST00000398706 (ZSWIM8-201) 73785624-73801797 protein_coding
ENST00000412198 (ZSWIM8-015) 73792731-73801792 protein_coding
ENST00000425051 (ZSWIM8-001) 73793884-73796360 processed_transcript
ENST00000431225 (ZSWIM8-020) 73792050-73794943 processed_transcript
ENST00000433366 (ZSWIM8-021) 73785683-73801608 nonsense_mediated_decay
ENST00000446546 (ZSWIM8-013) 73785655-73786679 retained_intron
ENST00000451629 (ZSWIM8-022) 73789502-73790256 processed_transcript
ENST00000466354 (ZSWIM8-003) 73800719-73801793 protein_coding
ENST00000466568 (ZSWIM8-002) 73800907-73801492 processed_transcript
ENST00000487278 (ZSWIM8-011) 73796371-73797450 processed_transcript
ENST00000489234 (ZSWIM8-009) 73794013-73796351 processed_transcript
ENST00000492395 (ZSWIM8-005) 73791324-73801793 nonsense_mediated_decay
ENST00000603114 (ZSWIM8-018) 73785624-73801792 protein_coding
ENST00000603187 (ZSWIM8-014) 73792522-73801792 protein_coding
ENST00000603195 (ZSWIM8-026) 73799310-73800795 processed_transcript
ENST00000603309 (ZSWIM8-025) 73800122-73801432 processed_transcript
ENST00000603409 (ZSWIM8-023) 73799062-73801166 processed_transcript
ENST00000603840 (ZSWIM8-017) 73799633-73800894 processed_transcript
ENST00000604165 (ZSWIM8-024) 73799074-73800935 processed_transcript
ENST00000604524 (ZSWIM8-019) 73785656-73801793 protein_coding
ENST00000604729 (ZSWIM8-027) 73785582-73801792 protein_coding
ENST00000604754 (ZSWIM8-016) 73792759-73801581 protein_coding
ENST00000605216 (ZSWIM8-012) 73785662-73801792 protein_coding
ENSG00000272589 (ZSWIM8-AS1)
ZSWIM8 antisense RNA 1 		ENST00000456638 (ZSWIM8-AS1-001) 73796514-73801399 antisense
ENSG00000272916 (RP11-574K11.31)
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 {ECO:0000313|Ensembl:ENSP00000475031} 		ENST00000603027 (RP11-574K11.31-001) 73796514-73811651 nonsense_mediated_decay
ENST00000603706 (RP11-574K11.31-002) 73797129-73803077 nonsense_mediated_decay
CIL_0006BH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021819-ENSMUSG00000039308 CGP 10090 14:20707552-20730327
GeneTranscriptPositionBiotype
ENSMUSG00000021819 (Zswim8)
zinc finger SWIM-type containing 8 		ENSMUST00000022358 (Zswim8-201) 20707552-20723618 protein_coding
ENSMUSG00000039308 (Ndst2)
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 		ENSMUST00000047490 (Ndst2-201) 20723739-20730327 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BH_0001ENSDARG00000069397ENSDART00000056432ENSDART00000100965ENSDART00000133108ENSDART00000144612ENSDARG00000084398ENSDART00000119798ENSDARG00000085094ENSDART00000120494ENSDARG00000086269ENSDART00000125149CIL_0006BH_0002ENSG00000166507ENST00000299641ENST00000309979ENST00000398701ENST00000429742ENST00000463410ENST00000465929ENSG00000214655ENST00000398706ENST00000412198ENST00000425051ENST00000431225ENST00000433366ENST00000446546ENST00000451629ENST00000466354ENST00000466568ENST00000487278ENST00000489234ENST00000492395ENST00000603114ENST00000603187ENST00000603195ENST00000603309ENST00000603409ENST00000603840ENST00000604165ENST00000604524ENST00000604729ENST00000604754ENST00000605216ENSG00000272589ENST00000456638ENSG00000272916ENST00000603027ENST00000603706CIL_0006BH_0003ENSMUSG00000021819ENSMUST00000022358ENSMUSG00000039308ENSMUST00000047490
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BH_0001ENSDARG00000069397ENSDART00000056432ENSDART00000100965ENSDART00000144612ENSDARG00000084398ENSDART00000119798ENSDARG00000085094ENSDART00000120494ENSDARG00000086269ENSDART00000125149CIL_0006BH_0002ENSG00000166507ENST00000299641ENST00000309979ENSG00000214655ENST00000398706ENST00000412198ENST00000425051ENST00000433366ENST00000603114ENST00000604524ENST00000604729ENST00000605216ENSG00000272589ENST00000456638ENSG00000272916ENST00000603027ENST00000603706CIL_0006BH_0003ENSMUSG00000021819ENSMUST00000022358ENSMUSG00000039308ENSMUST00000047490
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069397 ENSDART00000056432 N/A N/A N/A 7.868±0.00 N/A N/A 2.669±2.05 N/A 0.994±0.00 N/A 1.902±0.00 N/A N/A N/A
ENSDART00000100965 N/A N/A N/A 10.835±4.05 N/A N/A 4.984±3.28 5.640±2.19 N/A N/A 2.384±0.00 N/A N/A N/A
ENSDART00000133108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144612 N/A N/A N/A N/A N/A N/A 11.794±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000084398 ENSDART00000119798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.412±0.00 N/A N/A N/A
ENSDARG00000085094 ENSDART00000120494 N/A N/A N/A 87.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086269 ENSDART00000125149 N/A N/A N/A 0.628±0.65 N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166507 ENST00000299641 N/A 8.001±0.00 N/A N/A N/A N/A N/A N/A 3.554±0.00 4.379±0.00 N/A N/A N/A N/A
ENST00000309979 N/A N/A N/A 4.470±0.00 N/A N/A N/A N/A N/A N/A N/A 4.395±0.00 N/A N/A
ENST00000398701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214655 ENST00000398706 N/A N/A N/A N/A N/A 1.558±0.00 N/A 2.741±0.00 2.324±0.00 N/A N/A 3.266±0.00 N/A N/A
ENST00000412198 N/A N/A N/A 1.482±0.00 N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000425051 N/A N/A N/A N/A N/A N/A N/A 16.410±0.00 N/A N/A 5.858±0.00 N/A N/A N/A
ENST00000431225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433366 N/A N/A N/A N/A 3.078±0.48 N/A N/A 7.300±0.00 N/A N/A N/A 3.331±0.00 N/A N/A
ENST00000446546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.931±0.00 4.181±0.00 N/A
ENST00000603187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604524 N/A N/A 2.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604729 8.099±0.00 N/A 2.080±0.00 5.380±0.00 4.303±0.00 2.795±1.87 4.406±0.00 N/A 2.020±0.35 N/A N/A 6.016±2.98 5.139±1.82 N/A
ENST00000604754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.031±0.00 N/A
ENSG00000272589 ENST00000456638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.020±0.00 N/A N/A N/A
ENSG00000272916 ENST00000603027 7.004±0.00 8.838±0.00 N/A N/A 3.987±0.00 1.112±0.00 N/A N/A N/A N/A N/A N/A N/A 7.820±0.00
ENST00000603706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.756±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021819 ENSMUST00000022358 21.341±6.94 28.030±8.40 21.705±3.48 26.450±7.73 21.705±9.47 13.970±5.27 9.803±1.10 14.926±3.18 6.073±3.73 22.247±9.18 5.586±1.23 30.652±8.25 15.955±6.85 23.341±2.20
ENSMUSG00000039308 ENSMUST00000047490 9.701±1.64 6.768±1.88 5.507±2.78 6.579±2.51 12.824±1.67 6.152±1.19 0.619±0.00 4.661±2.52 6.922±3.17 6.369±2.64 1.284±0.87 11.283±6.74 3.016±1.24 4.999±2.21

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