C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214870 AC004540.5 9606 + 7:26398593-26494256 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000420774 AC004540.5-003 26398652-26399654 lincRNA
  ENST00000421862 AC004540.5-004 26398601-26494144 lincRNA
  ENST00000430548 AC004540.5-006 26398601-26480022 lincRNA
  ENST00000439120 AC004540.5-001 26398593-26494256 lincRNA
  ENST00000448056 AC004540.5-005 26440259-26494114 lincRNA
  ENST00000449537 AC004540.5-002 26398613-26399563 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420774ENST00000421862ENST00000439120ENST00000448056ENST00000449537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420774 0.656±0.00 1.079±0.00 N/A 0.204±0.00 1.098±0.00 N/A N/A 1.310±0.00 N/A N/A 0.241±0.00 0.281±0.00 0.739±0.37 1.023±0.17
ENST00000421862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 0.368±0.00
ENST00000439120 0.736±0.00 2.167±0.00 0.308±0.00 2.083±0.00 2.308±1.57 0.504±0.00 0.238±0.00 2.316±0.00 N/A 0.704±0.00 0.405±0.25 0.963±0.00 0.636±0.16 1.062±0.18
ENST00000448056 N/A N/A N/A N/A 0.640±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.348±0.00
ENST00000449537 N/A 1.164±0.00 N/A 0.744±0.00 1.101±0.00 N/A N/A N/A 0.127±0.00 0.637±0.00 N/A N/A 0.730±0.19 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DE CIL_0009DE_0001 VISTA 7:26185042-26786016
CIL_0007OD CIL_0007OD_0001 UCNEbase 7:26191819-26506343
CIL_0008JP CIL_0008JP_0001 VISTA 7:26366881-26968405
CIL_0008V2 CIL_0008V2_0001 VISTA 7:26389078-26990183

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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