C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: smoothelin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214872 SMTNL1 9606 + 11:57542641-57550274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399154 SMTNL1-201 57542643-57550274 protein_coding
  ENST00000527972 SMTNL1-001 57542641-57550274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399154ENST00000527972
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399154 N/A 0.023±0.00 N/A 0.185±0.00 0.014±0.00 0.127±0.00 0.126±0.00 0.125±0.09 N/A 0.100±0.00 0.034±0.01 N/A
ENST00000527972 0.060±0.00 N/A 6.478±0.00 N/A N/A N/A N/A N/A 87.118±0.00 0.177±0.06 N/A 1.047±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0008157 IEA protein phosphatase 1 binding
GO:0014823 IEA response to activity
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0031430 IEA M band
GO:0031674 IEA I band
GO:0042493 IEA response to drug
GO:0043292 IDA contractile fiber
GO:0045907 ISS positive regulation of vasoconstriction
GO:0045908 ISS negative regulation of vasodilation
GO:0048644 IEA muscle organ morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027077 Smtnl1 smoothelin-like 1 protein_coding Mus_musculus

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