C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon, gamma-inducible protein 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000216490 IFI30 9606 + 19:18173162-18178117 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000407280 IFI30-001 18173667-18178117 protein_coding
  ENST00000597802 IFI30-003 18173162-18175222 protein_coding
  ENST00000600463 IFI30-002 18174169-18178117 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverOvaryPlacentaENST00000407280
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000407280 104.113±0.00 30.634±0.00 8.214±0.00 37.642±22.04 9.557±0.00 26.913±0.00 16.677±0.00 4.342±0.00 80.173±0.00 324.850±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DQ CIL_0004DQ_0002 CGP 19:18153158-18178117
CIL_0004DR CIL_0004DR_0002 CGP 19:18173162-18196948

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005737 IDA cytoplasm
GO:0005764 IDA lysosome
GO:0005886 IDA plasma membrane
GO:0016667 IMP oxidoreductase activity, acting on a sulfur group of donors
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030054 IDA cell junction
GO:0042590 ISS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043202 TAS lysosomal lumen
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:0050821 IEA protein stabilization
GO:0055114 IEA oxidation-reduction process
GO:0060333 TAS interferon-gamma-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056378 ifi30 interferon gamma inducible protein 30 protein_coding Danio_rerio
ENSDARG00000075629 IFI30 (2 of 2) interferon, gamma-inducible protein 30 protein_coding Danio_rerio
ENSMUSG00000031838 Ifi30 interferon gamma inducible protein 30 protein_coding Mus_musculus

Loading