C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon, gamma-inducible protein 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407280 IFI30-001 ENSG00000216490 9606 + 19:18173667-18178117 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverOvaryPlacentaENST00000407280
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000407280 104.113±0.00 30.634±0.00 8.214±0.00 37.642±22.04 9.557±0.00 26.913±0.00 16.677±0.00 4.342±0.00 80.173±0.00 324.850±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DQ CIL_0004DQ_0002 CGP 19:18153158-18178117
CIL_0004DR CIL_0004DR_0002 CGP 19:18173162-18196948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005737 IDA cytoplasm
GO:0005764 IDA lysosome
GO:0005886 IDA plasma membrane
GO:0016667 IMP oxidoreductase activity, acting on a sulfur group of donors
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030054 IDA cell junction
GO:0042590 ISS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043202 TAS lysosomal lumen
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:0050821 IEA protein stabilization
GO:0055114 IEA oxidation-reduction process
GO:0060333 TAS interferon-gamma-mediated signaling pathway

Homologs

No Homologs available.

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