C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056378-ENSDARG00000056367 CGP 7955 2:24532156-24548501
GeneTranscriptPositionBiotype
ENSDARG00000056367 (mpv17l2)
MPV17 mitochondrial membrane protein-like 2 		ENSDART00000078854 (mpv17l2-001) 24540024-24548501 protein_coding
ENSDARG00000056378 (ifi30)
interferon gamma inducible protein 30 		ENSDART00000078866 (ifi30-001) 24532156-24537059 protein_coding
ENSDART00000136072 (ifi30-002) 24532227-24534177 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0004DR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000216490-ENSG00000254858 CGP 9606 19:18173162-18196948
GeneTranscriptPositionBiotype
ENSG00000105649 (RAB3A)
RAB3A, member RAS oncogene family 		ENST00000222256 (RAB3A-001) 18196784-18204074 protein_coding
ENST00000464076 (RAB3A-002) 18196799-18204042 protein_coding
ENST00000481914 (RAB3A-003) 18200327-18204012 protein_coding
ENST00000515410 (RAB3A-004) 18202338-18204035 retained_intron
ENSG00000216490 (IFI30)
interferon, gamma-inducible protein 30 		ENST00000407280 (IFI30-001) 18173667-18178117 protein_coding
ENST00000597802 (IFI30-003) 18173162-18175222 protein_coding
ENST00000600463 (IFI30-002) 18174169-18178117 retained_intron
ENSG00000268173 (PIK3R2)
phosphoinositide-3-kinase, regulatory subunit 2 (beta) 		ENST00000593731 (PIK3R2-001) 18153158-18178117 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DR_0001ENSDARG00000056367ENSDART00000078854ENSDARG00000056378ENSDART00000078866ENSDART00000136072CIL_0004DR_0002ENSG00000105649ENST00000222256ENST00000464076ENST00000481914ENST00000515410ENSG00000216490ENST00000407280ENST00000597802ENST00000600463ENSG00000268173ENST00000593731
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DR_0001ENSDARG00000056367ENSDART00000078854ENSDARG00000056378ENSDART00000078866ENSDART00000136072CIL_0004DR_0002ENSG00000105649ENST00000222256ENST00000464076ENST00000481914ENST00000515410ENSG00000216490ENST00000407280ENSG00000268173ENST00000593731
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056367 ENSDART00000078854 N/A N/A N/A 1.694±0.73 N/A N/A 1.034±0.61 1.873±0.92 3.070±0.00 N/A 1.169±0.00 N/A N/A N/A
ENSDARG00000056378 ENSDART00000078866 N/A N/A N/A 5.956±5.79 N/A N/A 26.604±18.74 62.884±60.87 3.555±0.00 N/A 10.462±0.00 N/A N/A N/A
ENSDART00000136072 N/A N/A N/A 0.944±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105649 ENST00000222256 0.766±0.00 1.445±0.00 N/A 92.710±65.88 1.037±0.45 2.915±0.00 3.374±2.76 2.043±0.00 N/A 2.470±0.00 N/A 12.916±7.33 1.468±0.00 2.379±0.02
ENST00000464076 N/A N/A N/A N/A N/A 1.663±0.00 0.486±0.00 N/A N/A 0.119±0.00 N/A N/A N/A N/A
ENST00000481914 N/A N/A N/A 69.074±0.00 N/A N/A N/A N/A N/A N/A N/A 0.510±0.00 N/A N/A
ENST00000515410 N/A N/A 1.476±0.00 N/A 2.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216490 ENST00000407280 104.113±0.00 30.634±0.00 8.214±0.00 N/A 37.642±22.04 9.557±0.00 26.913±0.00 16.677±0.00 4.342±0.00 N/A N/A 80.173±0.00 324.850±0.00 N/A
ENST00000597802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268173 ENST00000593731 N/A N/A N/A 0.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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