C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin A4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221866 PLXNA4 9606 - 7:132123332-132648688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321063 PLXNA4-201 132123332-132576564 protein_coding
  ENST00000359827 PLXNA4-001 132123341-132577301 protein_coding
  ENST00000378539 PLXNA4-002 132484758-132648688 protein_coding
  ENST00000423507 PLXNA4-004 132383488-132576470 protein_coding
  ENST00000496550 PLXNA4-005 132140604-132145507 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321063ENST00000359827ENST00000423507ENST00000496550
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321063 4.986±0.00 0.352±0.00 N/A 1.017±0.00 3.115±2.96 0.445±0.26 N/A 0.293±0.00 0.025±0.00 0.202±0.00 0.138±0.06 0.987±1.09 0.325±0.03 0.329±0.00
ENST00000359827 2.415±0.00 0.171±0.00 0.299±0.00 1.416±0.82 2.125±1.30 1.065±0.00 1.005±0.79 0.172±0.08 0.601±0.00 N/A N/A 0.993±0.64 0.349±0.10 N/A
ENST00000423507 N/A N/A N/A N/A 0.754±0.00 N/A N/A 0.131±0.00 0.752±0.00 N/A N/A N/A N/A N/A
ENST00000496550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024M CIL_00024M_0002 CGP 7:132123332-133082088

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002116 TAS semaphorin receptor complex
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0007411 TAS axon guidance
GO:0008045 IEA motor neuron axon guidance
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017154 IEA semaphorin receptor activity
GO:0021602 IEA cranial nerve morphogenesis
GO:0021610 IEA facial nerve morphogenesis
GO:0021612 IEA facial nerve structural organization
GO:0021615 IEA glossopharyngeal nerve morphogenesis
GO:0021636 IEA trigeminal nerve morphogenesis
GO:0021637 IEA trigeminal nerve structural organization
GO:0021644 IEA vagus nerve morphogenesis
GO:0021784 IEA postganglionic parasympathetic nervous system development
GO:0021785 IEA branchiomotor neuron axon guidance
GO:0021793 IEA chemorepulsion of branchiomotor axon
GO:0021960 IEA anterior commissure morphogenesis
GO:0048485 IEA sympathetic nervous system development
GO:0048812 IEA neuron projection morphogenesis
GO:0048841 IEA regulation of axon extension involved in axon guidance
GO:0050923 IEA regulation of negative chemotaxis
GO:0071526 NAS semaphorin-plexin signaling pathway
GO:1902287 IEA semaphorin-plexin signaling pathway involved in axon guidance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019328 plxna4 plexin A4 protein_coding Danio_rerio
ENSMUSG00000029765 Plxna4 plexin A4 protein_coding Mus_musculus

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