C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359827 PLXNA4-001 ENSG00000221866 9606 - 7:132123341-132577301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000359827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000359827 2.415±0.00 0.171±0.00 0.299±0.00 1.416±0.82 2.125±1.30 1.065±0.00 1.005±0.79 0.172±0.08 0.601±0.00 0.993±0.64 0.349±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024M CIL_00024M_0002 CGP 7:132123332-133082088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002116 TAS semaphorin receptor complex
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0007411 TAS axon guidance
GO:0008045 IEA motor neuron axon guidance
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017154 IEA semaphorin receptor activity
GO:0021602 IEA cranial nerve morphogenesis
GO:0021610 IEA facial nerve morphogenesis
GO:0021612 IEA facial nerve structural organization
GO:0021615 IEA glossopharyngeal nerve morphogenesis
GO:0021636 IEA trigeminal nerve morphogenesis
GO:0021637 IEA trigeminal nerve structural organization
GO:0021644 IEA vagus nerve morphogenesis
GO:0021784 IEA postganglionic parasympathetic nervous system development
GO:0021785 IEA branchiomotor neuron axon guidance
GO:0021793 IEA chemorepulsion of branchiomotor axon
GO:0021960 IEA anterior commissure morphogenesis
GO:0048485 IEA sympathetic nervous system development
GO:0048812 IEA neuron projection morphogenesis
GO:0048841 IEA regulation of axon extension involved in axon guidance
GO:0050923 IEA regulation of negative chemotaxis
GO:0071526 NAS semaphorin-plexin signaling pathway
GO:1902287 IEA semaphorin-plexin signaling pathway involved in axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115096 Plxna4-001 protein_coding Mus_musculus 0 8645
ENSDART00000016230 plxna4-001 protein_coding Danio_rerio 0 1611
ENSMUST00000049845 Plxna1-201 protein_coding Mus_musculus 0 1393
ENSMUST00000163139 Plxna1-202 protein_coding Mus_musculus 0 1393
ENSDART00000147998 PLXNA2-001 protein_coding Danio_rerio 0 1210
ENSDART00000109152 protein_coding Danio_rerio 0 1007
ENSMUST00000004326 Plxna3-001 protein_coding Mus_musculus 0 931
ENSMUST00000154062 Plxna3-002 retained_intron Mus_musculus 0 876
ENSDART00000084985 PLXNA2-201 protein_coding Danio_rerio 0 797
ENSMUST00000072093 Plxnb1-001 protein_coding Mus_musculus 2e-30 141

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