C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA, U6 small nuclear 233, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000222777 RNU6-233P 9606 - 17:39546104-39546244 snRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000410845 RNU6-233P-201 39546104-39546244 snRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyOvaryTestisENST00000410845
Transcript ID Adipose Breast Heart Kidney Ovary Testis
ENST00000410845 0.654±0.00 0.681±0.00 0.633±0.00 0.411±0.00 8.407±0.00 0.526±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_0007D3 CIL_0007D3_0001 CGP 17:39404285-39564907
CIL_0007D4 CIL_0007D4_0001 CGP 17:39461511-39609777

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000080381 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080785 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082688 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083556 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083928 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084122 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084261 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084333 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084408 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084431 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084499 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084550 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084597 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084680 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084727 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084968 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085159 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085177 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085333 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085487 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085720 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085900 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086193 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086817 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000087334 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000087559 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000087989 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000088196 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000088438 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000089081 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000089398 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000091286 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000091307 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000091794 U6 U6 spliceosomal RNA snRNA Danio_rerio

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