C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 52 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223501 VPS52 9606 - 6:33250272-33272047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000445902 VPS52-001 33250272-33271894 protein_coding
  ENST00000461743 VPS52-009 33263548-33264222 retained_intron
  ENST00000463486 VPS52-005 33267870-33271777 processed_transcript
  ENST00000464425 VPS52-004 33267871-33271884 processed_transcript
  ENST00000471309 VPS52-006 33251917-33264564 processed_transcript
  ENST00000478934 VPS52-002 33250272-33272047 processed_transcript
  ENST00000482399 VPS52-007 33250272-33271876 protein_coding
  ENST00000493379 VPS52-003 33264079-33267265 retained_intron
  ENST00000493674 VPS52-011 33250811-33264303 processed_transcript
  ENST00000495755 VPS52-008 33267466-33268153 retained_intron
  ENST00000495981 VPS52-010 33250606-33263613 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverENST00000445902
Transcript ID Bladder Brain Heart Kidney Liver
ENST00000445902 4.954±0.00 11.997±5.68 7.852±0.00 16.669±0.00 9.875±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0010668 IEA ectodermal cell differentiation
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0048611 IEA embryonic ectodermal digestive tract development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009175 vps52 vacuolar protein sorting 52 (yeast) protein_coding Danio_rerio
ENSMUSG00000024319 Vps52 vacuolar protein sorting 52 (yeast) protein_coding Mus_musculus

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