C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hemoglobin, delta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223609 HBD 9606 - 11:5232678-5235370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292901 HBD-003 5232678-5234483 protein_coding
  ENST00000380299 HBD-001 5232838-5234648 protein_coding
  ENST00000417377 HBD-002 5232930-5234483 protein_coding
  ENST00000429817 HBD-004 5233993-5235370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000292901ENST00000380299ENST00000417377
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000292901 N/A 0.100±0.00 0.186±0.00 N/A 0.893±0.00 0.042±0.00 N/A N/A N/A 0.085±0.00 N/A N/A
ENST00000380299 1.857±0.00 N/A N/A 0.179±0.00 3.328±0.00 N/A 0.219±0.00 0.212±0.00 33.120±0.00 0.059±0.02 6.445±5.06 0.444±0.28
ENST00000417377 N/A 0.704±0.00 N/A 0.088±0.00 N/A 0.230±0.00 N/A 0.182±0.00 16.070±0.00 0.388±0.00 0.555±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0001 VISTA 11:4975331-5576811
CIL_0003R8 CIL_0003R8_0004 CGP 11:5225464-5235370
CIL_0003R8 CIL_0003R8_0003 CGP 11:5232678-5249892

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005829 TAS cytosol
GO:0005833 IEA hemoglobin complex
GO:0007596 TAS blood coagulation
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038147 hbbe3 hemoglobin beta embryonic-3 protein_coding Danio_rerio
ENSDARG00000045143 hbbe2 hemoglobin beta embryonic-2 protein_coding Danio_rerio
ENSDARG00000069734 zgc:92880 zgc:92880 protein_coding Danio_rerio
ENSDARG00000087390 si:ch211-5k11.12 si:ch211-5k11.12 protein_coding Danio_rerio
ENSDARG00000089087 ba1 ba1 globin protein_coding Danio_rerio
ENSDARG00000089963 hbbe1.1 hemoglobin beta embryonic-1.1 protein_coding Danio_rerio
ENSDARG00000090689 hbbe1.2 hemoglobin beta embryonic-1.2 protein_coding Danio_rerio
ENSDARG00000097238 ba1l ba1 globin, like protein_coding Danio_rerio
ENSMUSG00000052305 Hbb-bs hemoglobin, beta adult s chain protein_coding Mus_musculus
ENSMUSG00000073940 Hbb-bt hemoglobin, beta adult t chain protein_coding Mus_musculus

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