C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 17 open reading frame 89
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000224877 C17orf89 9606 + 17:81239239-81241281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000431388 C17orf89-001 81239239-81241281 protein_coding
  ENST00000573090 C17orf89-005 81239311-81241214 retained_intron
  ENST00000573173 C17orf89-004 81239914-81241169 processed_transcript
  ENST00000575067 C17orf89-003 81239629-81239898 processed_transcript
  ENST00000576002 C17orf89-002 81239611-81241279 protein_coding
  ENST00000577158 C17orf89-007 81239305-81241081 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431388ENST00000573090ENST00000573173ENST00000576002ENST00000577158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431388 N/A N/A 3.744±0.00 24.997±0.00 4.839±1.36 2.465±0.00 8.793±5.91 19.025±2.47 2.210±0.00 1.984±0.00 23.039±14.77 10.206±5.63 10.498±1.76 4.261±0.00
ENST00000573090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 1.966±0.00 1.798±0.00
ENST00000573173 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.951±0.00 N/A N/A N/A 1.433±0.00
ENST00000576002 5.335±0.00 17.378±0.00 N/A 18.800±0.00 11.412±0.00 9.501±6.98 11.336±7.62 6.516±0.00 14.209±12.70 8.787±8.09 8.435±0.00 13.653±8.44 9.569±1.73 16.641±0.00
ENST00000577158 15.278±0.00 33.755±0.00 N/A 24.513±0.00 45.023±0.00 30.290±0.00 N/A 37.419±0.00 29.010±0.00 14.892±0.00 11.071±0.00 23.972±0.00 7.443±0.00 15.637±8.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U4 CIL_0003U4_0002 CGP 17:81228277-81241281
CIL_00043W CIL_00043W_0002 CGP 17:81239239-81295547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096749 C12H17orf89 chromosome 17 open reading frame 89 protein_coding Danio_rerio
ENSMUSG00000078572 1810043H04Rik RIKEN cDNA 1810043H04 gene protein_coding Mus_musculus

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