C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1810043H04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078572 1810043H04Rik 10090 + 11:120098928-120100705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106223 1810043H04Rik-001 120098928-120100705 protein_coding
  ENSMUST00000185558 1810043H04Rik-002 120098944-120100363 protein_coding
  ENSMUST00000186913 1810043H04Rik-003 120099099-120100414 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106223ENSMUST00000185558ENSMUST00000186913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106223 7.989±0.85 22.641±3.66 8.812±6.63 8.872±2.87 10.704±6.38 26.482±6.85 5.850±3.67 15.867±3.60 15.557±2.96 10.663±2.47 6.486±1.42 17.291±7.87 4.409±3.24 15.998±6.58
ENSMUST00000185558 4.197±1.42 11.094±1.55 N/A N/A 7.448±0.78 9.983±3.10 10.278±4.43 15.721±4.08 13.101±7.10 9.118±3.77 7.268±2.01 6.594±1.67 7.915±0.80 8.286±0.51
ENSMUST00000186913 6.997±0.70 8.475±1.25 12.336±0.06 24.261±27.25 5.914±2.91 7.064±0.27 10.919±1.43 11.927±3.32 5.437±1.47 6.302±0.52 9.908±2.49 9.887±5.88 20.703±14.02 30.110±35.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U4 CIL_0003U4_0003 CGP 11:120090531-120100705
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096749 C12H17orf89 chromosome 17 open reading frame 89 protein_coding Danio_rerio
ENSG00000224877 C17orf89 chromosome 17 open reading frame 89 protein_coding Homo_sapiens

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