C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096749-ENSDARG00000077081 CGP 7955 12:36496011-36559693
GeneTranscriptPositionBiotype
ENSDARG00000077081 (slc38a10)
solute carrier family 38, member 10 		ENSDART00000126420 (slc38a10-201) 36500663-36555252 protein_coding
ENSDART00000153097 (slc38a10-001) 36500667-36559693 protein_coding
ENSDART00000153320 (slc38a10-002) 36535616-36552957 protein_coding
ENSDARG00000096749 (C12H17orf89)
chromosome 17 open reading frame 89 		ENSDART00000153026 (C12H17orf89-001) 36496011-36498426 protein_coding
CIL_00043W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000224877-ENSG00000157637 CGP 9606 17:81239239-81295547
GeneTranscriptPositionBiotype
ENSG00000157637 (SLC38A10)
solute carrier family 38, member 10 		ENST00000288439 (SLC38A10-002) 81251196-81295267 protein_coding
ENST00000374759 (SLC38A10-001) 81245000-81295305 protein_coding
ENST00000539643 (SLC38A10-004) 81245004-81247635 retained_intron
ENST00000539748 (SLC38A10-006) 81282189-81295547 protein_coding
ENST00000540233 (SLC38A10-007) 81288733-81294914 processed_transcript
ENST00000540966 (SLC38A10-010) 81246178-81252273 protein_coding
ENST00000542075 (SLC38A10-003) 81246615-81285714 retained_intron
ENST00000543204 (SLC38A10-008) 81279699-81282264 protein_coding
ENST00000546352 (SLC38A10-009) 81260361-81282216 processed_transcript
ENST00000573058 (SLC38A10-011) 81250877-81252503 retained_intron
ENST00000576151 (SLC38A10-012) 81246272-81252272 protein_coding
ENSG00000224877 (C17orf89)
chromosome 17 open reading frame 89 		ENST00000431388 (C17orf89-001) 81239239-81241281 protein_coding
ENST00000573090 (C17orf89-005) 81239311-81241214 retained_intron
ENST00000573173 (C17orf89-004) 81239914-81241169 processed_transcript
ENST00000575067 (C17orf89-003) 81239629-81239898 processed_transcript
ENST00000576002 (C17orf89-002) 81239611-81241279 protein_coding
ENST00000577158 (C17orf89-007) 81239305-81241081 processed_transcript
ENSG00000279187 (RP11-455O6.5)
 ENST00000624065 (RP11-455O6.5-001) 81262920-81265401 TEC
CIL_00043W_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078572-ENSMUSG00000061306 CGP 10090 11:120098928-120151346
GeneTranscriptPositionBiotype
ENSMUSG00000061306 (Slc38a10)
solute carrier family 38, member 10 		ENSMUST00000045402 (Slc38a10-004) 120103960-120151346 protein_coding
ENSMUST00000053692 (Slc38a10-002) 120123844-120151346 protein_coding
ENSMUST00000076697 (Slc38a10-003) 120118872-120151346 protein_coding
ENSMUST00000103018 (Slc38a10-001) 120103960-120151346 protein_coding
ENSMUST00000124997 (Slc38a10-010) 120108537-120110338 processed_transcript
ENSMUST00000129128 (Slc38a10-011) 120105873-120110327 processed_transcript
ENSMUST00000129575 (Slc38a10-013) 120105792-120110446 processed_transcript
ENSMUST00000129710 (Slc38a10-012) 120105805-120110458 processed_transcript
ENSMUST00000132239 (Slc38a10-006) 120132855-120151320 processed_transcript
ENSMUST00000135605 (Slc38a10-005) 120137970-120151322 processed_transcript
ENSMUST00000146641 (Slc38a10-015) 120105621-120106988 processed_transcript
ENSMUST00000148503 (Slc38a10-014) 120105678-120108588 processed_transcript
ENSMUST00000150315 (Slc38a10-007) 120134807-120151287 processed_transcript
ENSMUST00000152859 (Slc38a10-009) 120139109-120142784 processed_transcript
ENSMUST00000154444 (Slc38a10-008) 120111004-120151279 processed_transcript
ENSMUST00000179094 (Slc38a10-201) 120104452-120151312 protein_coding
ENSMUSG00000078572 (1810043H04Rik)
RIKEN cDNA 1810043H04 gene 		ENSMUST00000106223 (1810043H04Rik-001) 120098928-120100705 protein_coding
ENSMUST00000185558 (1810043H04Rik-002) 120098944-120100363 protein_coding
ENSMUST00000186913 (1810043H04Rik-003) 120099099-120100414 retained_intron
ENSMUSG00000085636 (Gm11769)
predicted gene 11769 		ENSMUST00000140273 (Gm11769-001) 120150562-120152341 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043W_0001ENSDARG00000077081ENSDART00000126420ENSDART00000153097ENSDART00000153320ENSDARG00000096749ENSDART00000153026CIL_00043W_0002ENSG00000157637ENST00000288439ENST00000374759ENST00000539643ENST00000539748ENST00000540233ENST00000540966ENST00000542075ENST00000543204ENST00000546352ENST00000573058ENST00000576151ENSG00000224877ENST00000431388ENST00000573090ENST00000573173ENST00000575067ENST00000576002ENST00000577158ENSG00000279187ENST00000624065CIL_00043W_0003ENSMUSG00000061306ENSMUST00000045402ENSMUST00000053692ENSMUST00000076697ENSMUST00000103018ENSMUST00000124997ENSMUST00000129128ENSMUST00000129575ENSMUST00000129710ENSMUST00000132239ENSMUST00000135605ENSMUST00000146641ENSMUST00000148503ENSMUST00000150315ENSMUST00000152859ENSMUST00000154444ENSMUST00000179094ENSMUSG00000078572ENSMUST00000106223ENSMUST00000185558ENSMUST00000186913ENSMUSG00000085636ENSMUST00000140273
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043W_0001ENSDARG00000077081ENSDART00000126420ENSDART00000153097ENSDARG00000096749ENSDART00000153026CIL_00043W_0002ENSG00000157637ENST00000288439ENST00000374759ENST00000539643ENST00000542075ENSG00000224877ENST00000431388ENST00000573090ENST00000573173ENST00000576002ENST00000577158ENSG00000279187ENST00000624065CIL_00043W_0003ENSMUSG00000061306ENSMUST00000045402ENSMUST00000076697ENSMUST00000103018ENSMUST00000129575ENSMUST00000129710ENSMUST00000132239ENSMUST00000179094ENSMUSG00000078572ENSMUST00000106223ENSMUST00000185558ENSMUST00000186913ENSMUSG00000085636ENSMUST00000140273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077081 ENSDART00000126420 N/A N/A N/A 1.294±0.02 N/A N/A 3.072±1.35 2.965±0.00 0.553±0.00 N/A 1.071±0.00 N/A N/A N/A
ENSDART00000153097 N/A N/A N/A 1.747±0.73 N/A N/A 3.910±0.00 1.070±0.00 N/A N/A 0.473±0.00 N/A N/A N/A
ENSDART00000153320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096749 ENSDART00000153026 N/A N/A N/A 3.626±2.58 N/A N/A 4.382±2.98 2.359±0.53 0.381±0.00 N/A 4.681±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157637 ENST00000288439 N/A N/A 2.049±0.00 0.850±0.00 5.411±0.00 N/A 0.972±0.00 N/A 3.152±0.00 3.202±0.00 1.969±0.00 5.185±3.09 N/A 6.747±0.00
ENST00000374759 25.635±0.00 19.577±0.00 N/A 2.110±1.87 19.943±18.79 5.536±4.13 11.198±0.00 15.499±10.90 13.392±12.23 19.687±0.00 5.224±0.00 32.547±22.41 49.393±11.69 12.727±3.51
ENST00000539643 N/A 8.943±0.00 N/A N/A N/A 1.391±0.00 N/A N/A N/A 1.354±0.00 N/A 4.133±3.03 N/A N/A
ENST00000539748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542075 N/A N/A 0.466±0.00 N/A N/A 1.938±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224877 ENST00000431388 N/A N/A 3.744±0.00 24.997±0.00 4.839±1.36 2.465±0.00 8.793±5.91 19.025±2.47 2.210±0.00 1.984±0.00 23.039±14.77 10.206±5.63 10.498±1.76 4.261±0.00
ENST00000573090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 1.966±0.00 1.798±0.00
ENST00000573173 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.951±0.00 N/A N/A N/A 1.433±0.00
ENST00000575067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576002 5.335±0.00 17.378±0.00 N/A 18.800±0.00 11.412±0.00 9.501±6.98 11.336±7.62 6.516±0.00 14.209±12.70 8.787±8.09 8.435±0.00 13.653±8.44 9.569±1.73 16.641±0.00
ENST00000577158 15.278±0.00 33.755±0.00 N/A 24.513±0.00 45.023±0.00 30.290±0.00 N/A 37.419±0.00 29.010±0.00 14.892±0.00 11.071±0.00 23.972±0.00 7.443±0.00 15.637±8.99
ENSG00000279187 ENST00000624065 0.099±0.00 0.790±0.00 N/A 0.375±0.00 N/A 0.083±0.06 0.177±0.00 0.172±0.00 N/A 0.208±0.06 N/A 0.066±0.00 N/A 0.225±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000061306 ENSMUST00000045402 N/A N/A 3.293±0.00 4.078±0.00 N/A 4.808±0.00 N/A 6.707±0.00 2.961±0.76 5.991±0.00 1.050±0.00 6.809±1.80 3.946±0.22 4.160±0.88
ENSMUST00000053692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000076697 22.003±0.88 15.781±0.91 N/A N/A 36.817±10.08 15.641±3.81 N/A 23.172±2.34 8.739±1.51 28.111±5.39 N/A 40.976±8.28 N/A 10.078±0.00
ENSMUST00000103018 N/A N/A N/A 4.777±0.00 N/A N/A N/A N/A N/A N/A 1.383±0.00 N/A N/A N/A
ENSMUST00000124997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 101.308±0.00 46.490±5.44 59.800±0.00
ENSMUST00000129710 N/A N/A N/A 35.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132239 N/A N/A N/A N/A 52.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179094 29.153±4.41 12.703±4.56 9.662±3.62 16.120±7.77 21.989±10.79 15.617±4.92 19.263±5.44 24.148±9.89 10.466±5.24 29.148±2.55 3.334±0.94 28.904±7.63 23.055±7.19 9.594±2.78
ENSMUSG00000078572 ENSMUST00000106223 7.989±0.85 22.641±3.66 8.812±6.63 8.872±2.87 10.704±6.38 26.482±6.85 5.850±3.67 15.867±3.60 15.557±2.96 10.663±2.47 6.486±1.42 17.291±7.87 4.409±3.24 15.998±6.58
ENSMUST00000185558 4.197±1.42 11.094±1.55 N/A N/A 7.448±0.78 9.983±3.10 10.278±4.43 15.721±4.08 13.101±7.10 9.118±3.77 7.268±2.01 6.594±1.67 7.915±0.80 8.286±0.51
ENSMUST00000186913 6.997±0.70 8.475±1.25 12.336±0.06 24.261±27.25 5.914±2.91 7.064±0.27 10.919±1.43 11.927±3.32 5.437±1.47 6.302±0.52 9.908±2.49 9.887±5.88 20.703±14.02 30.110±35.64
ENSMUSG00000085636 ENSMUST00000140273 N/A 22.293±1.58 N/A N/A N/A 15.391±0.00 N/A N/A N/A N/A N/A 31.974±0.00 N/A N/A

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