C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LBX1 antisense RNA 1 (head to head)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000227128 LBX1-AS1 9606 + 10:101229594-101270148 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430651 LBX1-AS1-006 101236068-101238848 antisense
  ENST00000434878 LBX1-AS1-005 101237938-101270148 antisense
  ENST00000454527 LBX1-AS1-003 101232252-101238678 antisense
  ENST00000456391 LBX1-AS1-004 101238003-101238859 antisense
  ENST00000546988 LBX1-AS1-002 101229611-101238237 retained_intron
  ENST00000547077 LBX1-AS1-001 101229594-101232605 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungMuscleOvaryPlacentaTestisENST00000430651ENST00000454527ENST00000456391ENST00000546988ENST00000547077
Transcript ID Brain Lung Muscle Ovary Placenta Testis
ENST00000430651 N/A 0.203±0.00 0.286±0.00 N/A 0.031±0.00 0.738±0.00
ENST00000454527 0.043±0.00 N/A N/A N/A N/A 4.546±1.70
ENST00000456391 N/A N/A N/A N/A N/A 5.143±0.00
ENST00000546988 N/A N/A N/A 0.106±0.00 N/A N/A
ENST00000547077 N/A N/A N/A N/A 0.162±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0007ZR CIL_0007ZR_0001 VISTA 10:101034855-101635629
CIL_0001C6 CIL_0001C6_0002 CGP 10:101130505-101229794
CIL_00089J CIL_00089J_0001 VISTA 10:101185253-101786853
CIL_000942 CIL_000942_0001 VISTA 10:101206892-101808215
CIL_0007PC CIL_0007PC_0001 UCNEbase 10:101219422-101507851
CIL_0005NA CIL_0005NA_0001 CGP 10:101226195-101557321

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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