C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000229582 RP11-423C15.3 9606 - 9:125743754-125746552 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000444800 RP11-423C15.3-002 125743754-125745740 lincRNA
  ENST00000606827 RP11-423C15.3-001 125744347-125746552 retained_intron
  ENST00000614664 RP11-423C15.3-201 125744377-125746552 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444800ENST00000606827ENST00000614664
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.872±0.06
ENST00000606827 N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.002±0.00 N/A N/A 0.147±0.00 N/A 0.865±0.00
ENST00000614664 0.095±0.00 0.068±0.00 0.096±0.00 0.054±0.00 N/A 0.045±0.00 0.054±0.00 0.021±0.00 0.029±0.00 0.083±0.00 0.038±0.01 0.026±0.00 0.429±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080V CIL_00080V_0001 VISTA 9:125333480-125934659
CIL_0008LX CIL_0008LX_0001 VISTA 9:125343868-125945374
CIL_0007LN CIL_0007LN_0001 UCNEbase 9:125397521-126491100
CIL_0008Q0 CIL_0008Q0_0001 VISTA 9:125454655-126056093
CIL_0008GT CIL_0008GT_0001 VISTA 9:125458713-126060374
CIL_000961 CIL_000961_0001 VISTA 9:125460596-126063163
CIL_0008R5 CIL_0008R5_0001 VISTA 9:125463069-126064935
CIL_000848 CIL_000848_0001 VISTA 9:125521677-126122201
CIL_0008I6 CIL_0008I6_0001 VISTA 9:125544240-126146071
CIL_00086D CIL_00086D_0001 VISTA 9:125577886-126179048
CIL_0007YW CIL_0007YW_0001 VISTA 9:125583183-126184818
CIL_0007QH CIL_0007QH_0001 VISTA 9:125604132-126205273
CIL_000849 CIL_000849_0001 VISTA 9:125609586-126210723
CIL_000960 CIL_000960_0001 VISTA 9:125672879-126273895

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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